Recent PDB releases or updates: week of 16 August 2000
- 1dkp.pdb.
hydrolase 08-dec-99 1dkp
Hg
Title: crystal structure of phytate complex of escherichia coli phytase at ph 6.6. phytate is bound with its 3-phosphate in the active site. hg2+ cation acts as an intermolecular bridge
Author: d. lim, s. golovan, c. w. forsberg, z. jia
- 1dx0.pdb.
prion protein 15-dec-99 1dx0
(NMR, representative minimized structure)
Title: bovine prion protein residues 23-330
Author: f. lopez-garcia, r. zahn, r. riek, m. billeter, k. wuthrich
Keywords: brain, repeat
- 1du0.pdb.
transcription/dna 13-jan-00 1du0
Title: engrailed homeodomain q50a variant dna complex
Author: r. a. grant, m. a. rould, j. d. klemm, c. o. pabo
Keywords: dna-binding protein, protein-dna complex
- 1dqp.pdb.
transferase 04-jan-00 1dqp
Title: crystal structure of giardia guanine phosphoribosyltransferase complexed with immucilling
Author: w. shi, n. r. munagala, c. c. wang, c. m. li, p. c. tyler, r. h. furneaux, c. grubmeyer, v. l. schramm, s. c. almo
Keywords: immucilling, 9-deazaguanine
- 1et0.pdb.
lyase 12-apr-00 1et0
Title: crystal structure of aminodeoxychorismate lyase from escherichia coli
Author: t. nakai, h. mizutani, i. miyahara, k. hirotsu, s. takeda, k. h. jhee, t. yoshimura, n. esaki
- 1e1p.pdb.
prion protein 09-may-00 1e1p
(NMR, 20 structures)
Title: human prion protein variant s170n
Author: l. calzolai, d. a. lysek, p. guntert, c. von schroetter, r. zahn, r. riek, k. wuthrich
- 1e30.pdb.
rusticyanin 01-jun-00 1e30
Cu
Title: crystal structure of the met148gln mutant of rusticyanin at 1.5 angstrom resolution
Author: m. a. hough, r. w. strange, s. s. hasnain
Keywords: mutant, axial ligand, cupredoxin
- 1gb0.pdb.
hydrolase 26-jun-00 1gb0
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
- 1cqp.pdb.
immune system 10-aug-99 1cqp
Mg
Title: crystal structure analysis of the complex lfa-1 (cd11a) i- domain / lovastatin at 2.6 a resolution
Author: j. kallen, k. welzenbach, p. ramage, d. geyl, r. kriwacki, g. legge, s. cottens, g. weitz-schmidt, u. hommel
Keywords: structural basis for lfa-1 inhibition
- 1c9p.pdb.
hydrolase/hydrolase inhibitor 03-aug-99 1c9p
Ca
Title: complex of bdellastasin with porcine trypsin
Author: u. rester
Keywords: hydrolase, inhibitor, antistasin, plasmin, isoaspartate
- 1c1p.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c1p
Mg Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1qd0.pdb.
immune system 08-jul-99 1qd0
Cu
Title: camelid heavy chain variable domains provide efficient combining sites to haptens
Author: s. spinelli, l. g. j. frenken, p. hermans, t. verrips, k. brown, m. tegoni, c. cambillau
Keywords: immunoglobulin fragment, azo-dye, immune system
- 2pva.pdb.
hydrolase 13-nov-98 2pva
Title: oxidized penicillin v acylase from b. sphaericus
Author: c. g. suresh, a. v. pundle, k. n. rao, h. sivaraman, j. a. brannigan, c. e. mcvey, c. s. verma, z. dauter, e. j. dodson, g. g. dodson
Keywords: ntn hydrolase, penicillin v acylase
- 1dkq.pdb.
hydrolase 08-dec-99 1dkq
Hg
Title: crystal structure of phytate complex escherichia coli phytase at ph 5.0. phytate is bound with its 3-phosphate in the active site. hg2+ cation acts as an intermolecular bridge
Author: d. lim, s. golovan, c. w. forsberg, z. jia
- 1dx1.pdb.
prion protein 15-dec-99 1dx1
(NMR, 20 structures)
Title: bovine prion protein residues 23-330
Author: f. lopez-garcia, r. zahn, r. riek, m. billeter, k. wuthrich
Keywords: brain, repeat
- 1du1.pdb.
signaling protein 13-jan-00 1du1
(NMR, minimized average structure)
Title: peptide fragment thr671-leu690 of the rabbit skeletal dihydropyridine receptor
Author: m. casarotto, a. dulhunty
Keywords: ryanodine receptor, nmr structure
- 1eoq.pdb.
virus/viral protein 23-mar-00 1eoq
(NMR, minimized average structure)
Title: rous sarcoma virus capsid protein: c-terminal domain
Author: r. l. kingston, t. fitzon-ostendorp, e. z. eisenmesser, g. w. schatz, v. m. vogt, c. b. post, m. g. rossman
- 1ez1.pdb.
transferase 09-may-00 1ez1
Mg Na
Title: structure of escherichia coli purt-encoded glycinamide ribonucleotide transformylase complexed with mg, amppnp, and gar
Author: j. b. thoden, s. firestine, a. nixon, s. j. benkovic, h. m. holden
Keywords: transformylase, atp-grasp
- 1eu1.pdb.
oxidoreductase 13-apr-00 1eu1
Mo Cd
Title: the crystal structure of rhodobacter sphaeroides dimethylsulfoxide reductase reveals two distinct molybdenum coordination environments.
Author: h. k. li, k. temple, k. v. rajagopalan, h. schindelin
Keywords: molybdenum cofactor, dmso, reductase, molybdopterin, mgd
- 1f8q.pdb.
hydrolase 03-jul-00 1f8q
Title: crystal structure of alpha-momorcharin in acetonitrile- water mixture
Author: g. zhu, q. huang, m. qian, y. jia, y. tang
Keywords: organic slovent, momorcharin
- 1f6a.pdb.
immune system 20-jun-00 1f6a
Title: structure of the human ige-fc bound to its high affinity receptor fc(epsilon)ri(alpha)
Author: s. c. garman, b. a. wurzburg, s. s. tarchevskaya, j. p. kinet, t. s. jardetzky
Keywords: glycoprotein, receptor, ige-binding protein, ige antibody, ige-fc
- 1f2a.pdb.
hydrolase 23-may-00 1f2a
Title: crystal structure analysis of cruzain bound to a vinyl sulfone derived inhibitor (ii)
Author: l. s. brinen, e. hansell, w. r. roush, j. h. mckerrow, r. j. fletterick
Keywords: covalent inhibitor, vinyl sulfone derived, p1' pocket
- 1c9q.pdb.
apoptosis 03-aug-99 1c9q
Zn
(NMR, minimized average structure)
Title: average nmr solution structure of the bir-2 domain of xiap
Author: r. p. meadows, s. w. fesik
Keywords: apoptosis, inhibitor
- 1c41.pdb.
transferase 03-aug-99 1c41
Title: crystal structures of a pentameric fungal and an icosahedral plant lumazine synthase reveals the structural basis for differences in assembly
Author: k. persson, g. schneider, d. b. jordan, p. v. viitanen, t. sandalova
- 1c01.pdb.
antimicrobial protein 13-jul-99 1c01
(NMR)
Title: solution structure of miamp1, a plant antimicrobial protein
Author: a. m. mcmanus, k. j. nielsen, j. p. marcus, s. j. harrison, j. l. green, j. m. manners, d. j. craik
Keywords: beta-barrel
- 1c1q.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c1q
Mg Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 3car.pdb.
electron transport 17-nov-98 3car
Zn Fe As
Title: reduced structure of the acidic cytochrome c3 from desulfovibrio africanus
Author: s. norager, p. legrand, l. pieulle, c. hatchikian, m. roth
Keywords: tetraheme, reduced form, electron transport, desulfovibrio africanus
- 1ehb.pdb.
electron transport 20-feb-00 1ehb
Fe
Title: crystal structure of recombinant trypsin-solubilized fragment of cytochrome b5
Author: j. wu, j. -h. gan, z. -x. xia, y. -h. wang, w. -h. wang, l. -l. xue, y. xie, z. -x. huang
- 1exb.pdb.
metal transport 02-may-00 1exb
Title: structure of the cytoplasmic beta subunit-t1 assembly of voltage-dependent k channels
Author: j. m. gulbis, m. zhou, s. mann, r. mackinnon
Keywords: oxidoreductase, beta subunit
- 1e22.pdb.
ligase 11-may-00 1e22
Mg
Title: lysyl-trna synthetase (lysu) hexagonal form complexed with lysine and the non-hydrolysable atp analogue amp-pcp
Author: g. desogus, f. todone, p. brick, s. onesti
Keywords: aminoacyl-trna synthetase, protein biosynthesis
- 1f2b.pdb.
hydrolase 23-may-00 1f2b
Title: crystal structure analysis of cruzain bound to vinyl sulfone derived inhibitor (iii)
Author: l. s. brinen, e. hansell, w. r. roush, j. h. mckerrow, r. j. fletterick
Keywords: covalent inhibitor, vinyl sulfone- derived, p1' pocket
- 1gb2.pdb.
hydrolase 26-jun-00 1gb2
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1c1b.pdb.
transferase 21-jul-99 1c1b
Title: crystal structure of hiv-1 reverse transcriptase in complex with gca-186
Author: a. l. hopkins, j. ren, h. tanaka, b. baba, m. okamato, d. i. stuart, d. k. stammers
Keywords: aids, non-nucleoside inhibitor, drug design, transferase
- 1c1r.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c1r
Mg Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1qo2.pdb.
isomerase 01-nov-99 1qo2
Se
Title: crystal structure of n-((5'-phosphoribosyl)-formimino)-5- aminoimidazol-4-carboxamid ribonucleotid isomerase (ec 3.1.3.15, hisa)
Author: m. wilmanns, d. lang, r. thoma, r. sterner
Keywords: histidine biosynthesis, thermophilic protein
- 1dus.pdb.
structural genomics 18-jan-00 1dus
Se
Title: mj0882-a hypothetical protein from m. jannaschii
Author: l. w. hung, l. huang, r. kim, s. h. kim
Keywords: methanococcus jannaschii
- 1d9s.pdb.
signaling protein 29-oct-99 1d9s
(NMR, 10 structures)
Title: tumor suppressor p15(ink4b) structure by comparative modeling and nmr data
Author: c. yuan, t. l. selby, i. j. l. byeon, m. d. tsai
Keywords: ankyrin repeat
- 1ems.pdb.
antitumor protein 17-mar-00 1ems
Hg Na
Title: crystal structure of the c. elegans nitfhit protein
Author: h. c. pace, s. c. hodawadekar, a. draganescu, j. huang, p. bieganowski, y. pekarsky, c. m. croce, c. brenner
Keywords: nitrilase, fhit, nucleotide-binding protein, cancer, diadenosine polyphosphate hydrolase, histidine triad, tumor suppressor, rosetta stone
- 1eds.pdb.
ion transport 28-jan-00 1eds
(NMR)
Title: solution structure of intradiskal loop 1 of bovine rhodopsin (rhodopsin residues 92-123)
Author: p. l. yeagle, a. salloum, a. chopra, n. bhawsar, l. ali
- 1euc.pdb.
ligase 14-apr-00 1euc
Zn
Title: crystal structure of dephosphorylated pig heart, gtp- specific succinyl-coa synthetase
Author: m. e. fraser, m. n. g. james, w. a. bridger, w. t. wolodko
Keywords: gtp-specific
- 1e1s.pdb.
prion protein 10-may-00 1e1s
(NMR, regularized mean structure)
Title: human prion protein variant s170n
Author: l. calzolai, d. a. lysek, p. guntert, c. von schroetter, r. zahn, r. riek, k. wuthrich
- 1fb3.pdb.
oxidoreductase 14-jul-00 1fb3
Title: crystal structure analysis of the ferredoxin-nadp+ reductase from paprika
Author: a. dorowski, c. steegborn, a. hofmann, m. boicu, r. huber
Keywords: rossmann fold
- 1f43.pdb.
transcription 07-jun-00 1f43
(NMR, 20 structures)
Title: solution structure of the mata1 homeodomain
Author: j. s. anderson, m. forman, s. modleski, f. w. dahlquist, s. m. baxter
Keywords: helix-turn-helix
- 1f63.pdb.
oxygen storage/transport 20-jun-00 1f63
Fe
Title: crystal structure of deoxy sperm whale myoglobin mutant y(b10)q(e7)r(e10)
Author: m. brunori, f. cutruzzola, c. savino, c. travaglini-allocatelli, b. vallone, q. h. gibson
Keywords: heme, triple mutant
- 1f2c.pdb.
hydrolase 23-may-00 1f2c
Title: crystal structure analysis of cryzain bound to vinyl sulfone derived inhibitor (iv)
Author: l. s. brinen, e. hansell, w. r. roush, j. h. mckerrow, r. j. fletterick
Keywords: covalent inhibitor, vinyl sulfonamide derived, p1' pocket
- 1gb3.pdb.
hydrolase 26-jun-00 1gb3
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1c1c.pdb.
transferase 21-jul-99 1c1c
Title: crystal structure of hiv-1 reverse transcriptase in complex with tnk-6123
Author: a. l. hopkins, j. ren, h. tanaka, m. baba, m. okamato, d. i. stuart, d. k. stammers
Keywords: aids, non-nucleoside inhibitor, drug design
- 1c1s.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c1s
Na Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1dx4.pdb.
hydrolase (serine esterase) 20-dec-99 1dx4
Title: ache from drosophila melanogaster complex with tacrine derivative 9-(3-phenylmethylamino)-1,2,3,4-tetrahydroacridine
Author: m. harel, i. silman, j. l. sussman
Keywords: hydrolase, serine esterase, synapse, membrane, nerve, muscle, signal, neurotransmitter degradation, glycoprotein, gpi-anchor, alternative splicing
- 1eud.pdb.
ligase 14-apr-00 1eud
Title: crystal structure of phosphorylated pig heart, gtp-specific succinyl-coa synthetase
Author: m. e. fraser, m. n. g. james, w. a. bridger, w. t. wolodko
Keywords: gtp-specific, phosphonohistidine
- 1e1t.pdb.
ligase 10-may-00 1e1t
Mg
Title: lysyl-trna synthetase (lysu) hexagonal form complexed with the lysyl_adenylate intermediate
Author: g. desogus, f. todone, p. brick, s. onesti
Keywords: aminoacyl-trna synthetase, protein biosynthesis
- 1e24.pdb.
ligase 15-may-00 1e24
Mn
Title: lysyl-trna synthetase (lysu) hexagonal form complexed with lysine and atp and mn2+
Author: g. desogus, f. todone, p. brick, s. onesti
Keywords: aminoacyl-trna synthetase, protein biosynthesis
- 1f94.pdb.
toxin 06-jul-00 1f94
Title: the 0.97 resolution structure of bucandin, a novel toxin isolated from the malayan krait
Author: p. kuhn, a. m. deacon, s. comoso, g. rajaseger, r. m. kini, i. uson, p. r. kolatkar
- 1f9d.pdb.
hydrolase 10-jul-00 1f9d
Ca
Title: crystal structure of the cellulase cel48f from c. cellulolyticum in complex with cellotetraose
Author: g. parsiegla, c. reverbel-leroy, c. tardif, j. p. belaich, h. driguez, r. haser
Keywords: protein-cellotetraose complex
- 1f2t.pdb.
replication 29-may-00 1f2t
Title: crystal structure of atp-free rad50 abc-atpase
Author: k. p. hopfner, a. karcher, d. s. shin, l. craig
Keywords: abc atpase
- 1c8d.pdb.
virus/viral protein 05-may-00 1c8d
Ca
Title: canine panleukopenia virus empty capsid structure
Author: m. g. rossmann, a. a. simpson
Keywords: canine parvovirus, strain d, empty capsid, a300d
- 1c8t.pdb.
hydrolase/hydrolase inhibitor 29-jul-99 1c8t
Zn Ca
Title: human stromelysin-1 (e202q) catalytic domain complexed with ro-26-2812
Author: d. l. steele, o. el-kabbani, p. dunten, r. l. crowther
Keywords: mutant protein
- 1c9t.pdb.
hydrolase/hydrolase inhibitor 03-aug-99 1c9t
Title: complex of bdellastasin with bovine trypsin
Author: u. rester, w. bode, m. moser, m. a. parry, r. huber, e. auerswald
Keywords: hydrolase, inhibitor, antistasin, plasmin
- 1c44.pdb.
lipid binding protein 02-jul-99 1c44
Title: sterol carrier protein 2 (scp2) from rabbit
Author: t. choinowski, h. hauser, k. piontek
Keywords: non specific lipid transfer protein, fatty acid binding, fatty acyl coa binding
- 1c74.pdb.
hydrolase 22-jan-00 1c74
Ca
Title: structure of the double mutant (k53,56m) of phospholipase a2
Author: k. sekar, m. -d. tsai, m. k. jain, s. ramakumar
Keywords: beta sheet, double mutant
- 1c0t.pdb.
transferase 19-jul-99 1c0t
Title: crystal structure of hiv-1 reverse transcriptase in complex with bm+21.1326
Author: j. ren, r. m. esnouf, a. l. hopkins, d. i. stuart, d. k. stammers
Keywords: aids, non-nucleoside inhibitor, drug design
- 1c14.pdb.
oxidoreductase 20-jul-99 1c14
Cl
Title: crystal structure of e coli enoyl reductase-nad+-triclosan complex
Author: x. qiu, c. janson, r. court, m. smyth, d. payne, s. abdel-meguid
Keywords: fabi, enoyl reductase, oxidoreductase
- 1c1t.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c1t
Mg Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1c2d.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2d
Mg Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, hydrolase/hydrolase inhibitor
- 1de5.pdb.
isomerase 12-nov-99 1de5
Zn
Title: l-rhamnose isomerase
Author: i. p. korndorfer, w. d. fessner, b. w. matthews
Keywords: tim barrel, hydride shift
- 1ec5.pdb.
de novo protein 25-jan-00 1ec5
Zn
Title: crystal structure of four-helix bundle model
Author: s. geremia
Keywords: protein design
- 1eyu.pdb.
hydrolase/dna 09-may-00 1eyu
Title: high resolution structure of the pvuii endonculease/cognate dna complex at ph 4.6
Author: j. r. horton, x. cheng
Keywords: endonuclease type ii, restriction enzyme
- 1e1u.pdb.
prion protein 10-may-00 1e1u
(NMR, 20 structures)
Title: human prion protein variant r220k
Author: l. calzolai, d. a. lysek, p. guntert, c. von schroetter, r. zahn, r. riek, k. wuthrich
- 1fae.pdb.
hydrolase 13-jul-00 1fae
Ca
Title: crystal structure of the cellulase cel48f from c. cellulolyticum in complex with cellobiose
Author: g. parsiegla, c. reverbel-leroy, c. tardif, j. p. belaich, h. driguez, r. haser
Keywords: protein-cellobiose complex
- 1fau.pdb.
transferase 13-jul-00 1fau
(theoretical model)
Title: building by homology of human tissue transglutaminase
Author: r. casadio, e. polverini, p. mariani, f. spinozzi, f. carsughi, a. fontana, p. polverino de laureto, g. matteucci, c. m. bergamini
Keywords: transglutaminase
- 1f65.pdb.
oxygen storage/transport 20-jun-00 1f65
Fe
Title: crystal structure of oxy sperm whale myoglobin mutant y(b10) q(e7)r(e10)
Author: m. brunori, f. cutruzzola, c. savino, c. travaglini-allocatelli, b. vallone, q. h. gibson
Keywords: heme, triple mutant
- 1f05.pdb.
transferase 14-may-00 1f05
Title: crystal structure of human transaldolase
Author: g. schneider, s. thorell
- 1f2u.pdb.
replication 29-may-00 1f2u
Mg
Title: crystal structure of rad50 abc-atpase
Author: k. p. hopfner, a. karcher, d. s. shin, l. craig
Keywords: abc-atpase
- 1gb5.pdb.
hydrolase 26-jun-00 1gb5
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1c8e.pdb.
virus/viral protein 05-may-00 1c8e
Title: feline panleukopenia virus empty capsid structure
Author: m. g. rossmann, a. a. simpson
Keywords: viral capsid, icosahedral symmetry
- 1c55.pdb.
toxin 19-oct-99 1c55
(NMR, 35 structures)
Title: nmr solution structure of butantoxin
Author: s. k. holaday jr. , b. m. martin, p. l. fletcher jr. , n. r. krishna
Keywords: nmr structure
- 1c0u.pdb.
transferase 19-jul-99 1c0u
Title: crystal structure of hiv-1 reverse transcriptase in complex with bm+50.0934
Author: j. ren, r. m. esnouf, a. l. hopkins, d. i. stuart, d. k. stammers
Keywords: aids, non-nucleoside inhibitor, drug design
- 1c1u.pdb.
blood clotting 21-jul-99 1c1u
Zn Na
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, blood clotting
- 1c2e.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2e
Mg Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1de6.pdb.
isomerase 13-nov-99 1de6
Mn Zn
Title: l-rhamnose isomerase
Author: i. p. korndorfer, w. d. fessner, b. w. matthews
Keywords: tim barrel, hydride shift
- 1dtv.pdb.
hydrolase inhibitor 13-jan-00 1dtv
(NMR, minimized average structure)
Title: nmr structure of the leech carboxypeptidase inhibitor (lci)
Author: d. reverter, c. fernandez-catalan, w. bode, t. a. holak, f. x. aviles
Keywords: lci
- 1duf.pdb.
deoxyribonucleic acid 17-jan-00 1duf
(NMR, 5 structures)
Title: the nmr structure of dna dodecamer determined in aqueous dilute liquid crystalline phase
Author: n. tjandra, s. tate, a. ono, m. kainosho, a. bax
Keywords: double helix, dipolar coupling
- 1dw6.pdb.
hydrolase/hydrolase inhibitor 24-jan-00 1dw6
Title: structural and kinetic analysis of drug resistant mutants of hiv-1 protease
Author: b. mahalingam, j. m. louis, c. c. reed, j. m. adomat, j. krouse, y. f. wang, r. w. harrison, i. t. weber
Keywords: mutant, dimer, inhibitor
- 1ehv.pdb.
deoxyribonucleic acid 23-feb-00 1ehv
Title: a new crystal structure for the dodecamer c-g-c-g-a-a-t-t-c- g-c-g: symmetry effects on sequence-dependent dna structure
Author: e. m. johansson
Keywords: crystal packing, dna
- 1edv.pdb.
ion transport 28-jan-00 1edv
(NMR)
Title: solution structure of 2nd intradiskal loop of bovine rhodopsin (residues 172-205)
Author: p. l. yeagle, a. salloum, a. chopra, n. bhawsar, l. ali
- 1esv.pdb.
contractile protein 11-apr-00 1esv
Ca
Title: complex between latrunculin a:rabbit muscle alpha actin:human gelsolin domain 1
Author: w. m. morton, k. a. ayscough, p. j. mclaughlin
Keywords: gelsolin, actin, depolymerisation, sequestration
- 1e4v.pdb.
transferase(phosphotransferase) 12-jul-00 1e4v
Title: mutant g10v of adenylate kinase from e. coli, modified in the gly-loop
Author: c. w. mueller, g. e. schulz
- 1e2v.pdb.
electron transport proteins 27-may-00 1e2v
Fe
Title: n153q mutant of cytochrome f from chlamydomonas reinhardtii
Author: g. sainz, c. j. carrell, m. v. ponamarev, g. m. soriano, w. a. cramer, j. l. smith
Keywords: photosynthetic function impaired
- 1fdf.pdb.
signaling protein 20-jul-00 1fdf
(NMR, minimized average structure)
Title: helix 7 bovine rhodopsin
Author: p. l. yeagle, c. danis, g. choi, j. alderfer, a. albert
- 1gb6.pdb.
hydrolase 26-jun-00 1gb6
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1cqf.pdb.
toxin 06-aug-99 1cqf
Title: the complex of the mutated shiga toxin b subunit and gb3 trisaccharide
Author: h. ling, d. bast, j. l. brunton, r. j. read
Keywords: sugar receptor binding domain, protein- carbohydrate recognition, ob-fold
- 1c8f.pdb.
virus/viral protein 05-may-00 1c8f
Ca
Title: feline panleukopenia virus empty capsid structure
Author: m. g. rossmann, a. a. simpson
Keywords: viral capsid, icosahedral symmetry
- 1c56.pdb.
toxin 25-oct-99 1c56
(NMR, minimized average structure)
Title: nmr solution structure of butantoxin
Author: s. k. holaday jr. , b. m. martin, p. l. fletcher jr. , n. r. krishna
Keywords: toxin, nmr structure
- 1c76.pdb.
hydrolase 01-feb-00 1c76
Title: staphylokinase (sak) monomer
Author: z. rao, f. jiang, y. liu, x. zhang, y. chen, m. bartlam, h. song, y. ding
- 1c1v.pdb.
blood clotting 21-jul-99 1c1v
Zn Na
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor
- 1c2f.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2f
Mg Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1thf.pdb.
lyase 17-sep-98 1thf
Title: cyclase subunit of imidazoleglycerolphosphate synthase from thermotoga maritima
Author: d. a. lang, m. wilmanns
Keywords: tim-barrel, histidine biosynthesis, lyase, phosphate-binding sites
- 1qmv.pdb.
peroxidase 07-oct-99 1qmv
Title: thioredoxin peroxidase b from red blood cells
Author: n. n. isupov, j. a. littlechild, a. a. lebedev, n. errington, a. a. vagin, e. schroder
Keywords: peroxiredoxin, sulphinic acid, thioredoxin
- 1qjv.pdb.
hydrolase (aspartyl esterase) 05-jul-99 1qjv
Cl
Title: pectin methylesterase pema from erwinia chrysanthemi
Author: j. jenkins, o. mayans, d. smith, k. worboys, r. pickersgill
Keywords: pectin degradation, right-handed parallel beta helix
- 1qff.pdb.
metal transport 17-mar-00 1qff
Fe Se
Title: e. coli ferric hydroxamate uptake receptor (fhua) in complex with bound ferrichrome-iron
Author: a. d. ferguson, e. hofmann, j. w. coulton, k. diederichs, w. welte
Keywords: integral outer membrane protein, siderophore-iron receptor, active transport, lipopolysaccharide, ferrichrome receptor
- 1qqf.pdb.
immune system 04-jun-99 1qqf
Title: n-terminally truncated c3d,g fragment of the complement system
Author: g. zanotti, a. bassetto, r. battistutta, m. stoppini, r. berni
Keywords: complement
- 1dt7.pdb.
signaling protein 11-jan-00 1dt7
Ca
(NMR, 40 structures)
Title: solution structure of the c-terminal negative regulatory domain of p53 in a complex with ca2+-bound s100b(bb)
Author: r. r. rustandi, d. m. baldisseri, d. j. weber
Keywords: p53, c-terminal domain of p53, calcium-binding, nmr, ef-hand, s100 protein, four helix bundle, helix loop helix
- 1edw.pdb.
ion transport 28-jan-00 1edw
(NMR)
Title: solution structure of third intradiskal loop of bovine rhodopsin (residues 268-293)
Author: p. l. yeagle, a. salloum, a. chopra, n. bhawsar, l. ali
- 1exw.pdb.
hydrolase 04-may-00 1exw
Title: crystal structure of palmitoyl protein thioesterase 1 complexed with hexadecylsulfonyl fluoride
Author: j. j. bellizzi iii, j. clardy
Keywords: palmitoyl protein thioesterase, pmsf
- 1eyg.pdb.
replication/dna 06-may-00 1eyg
Title: crystal structure of chymotryptic fragment of e. coli ssb bound to two 35-mer single strand dnas
Author: s. raghunathan, g. waksman
Keywords: ob fold,se met,mad phasing,ssb,binding mode
- 1evw.pdb.
hydrolase/dna 20-apr-00 1evw
Mg Zn
Title: l116a mutant of the homing endonuclease i-ppoi complexed to homing site dna.
Author: e. a. galburt, m. s. jurica, b. s. chevalier, d. erho, b. l. stoddard
- 1eww.pdb.
antifreeze protein 27-apr-00 1eww
(NMR, 20 structures)
Title: solution structure of spruce budworm antifreeze protein at 30 degrees celsius
Author: s. p. graether, m. j. kuiper, s. m. gagne, v. k. walker, z. jia, b. d. sykes, p. l. davies
Keywords: antifreeze protein, ice, insect
- 1e1g.pdb.
prion protein 04-may-00 1e1g
(NMR, 20 structures)
Title: human prion protein variant m166v
Author: l. calzolai, d. a. lysek, p. guntert, c. von schroetter, r. zahn, r. riek, k. wuthrich
- 1e1w.pdb.
prion protein 11-may-00 1e1w
(NMR, regularized mean structure)
Title: human prion protein variant r220k
Author: l. calzolai, d. a. lysek, p. guntert, c. von schroetter, r. zahn, r. riek, k. wuthrich
- 1e2w.pdb.
electron transport proteins 29-may-00 1e2w
Fe
Title: n168f mutant of cytochrome f from chlamydomonas reinhardtii
Author: g. sainz, c. j. carrell, m. v. ponamarev, g. m. soriano, w. a. cramer, j. l. smith
Keywords: photosynthetic function impaired
- 1fbw.pdb.
hydrolase 17-jul-00 1fbw
Ca
Title: crystal structure of the cellulase cel48f from c. cellulolyticum in complex with cellohexaose
Author: g. parsiegla, c. reverbel-leroy, c. tardif, j. p. belaich, h. driguez, r. haser
Keywords: protein-cellohexaose complex
- 1f4w.pdb.
immune system 10-jun-00 1f4w
Title: crystal structure of an anti-carbohydrate antibody directed against vibrio cholerae o1 in complex with antigen
Author: p. m. alzari, h. souchon
- 1f77.pdb.
toxin 26-jun-00 1f77
Title: staphylococcal enterotoxin h determined to 2.4 a resolution
Author: m. hakansson, k. petersson, h. nilsson, g. forsberg, p. bjork
Keywords: beta-grasp
- 1f37.pdb.
electron transport 31-may-00 1f37
Fe
Title: structure of a thioredoxin-like [2fe-2s] ferredoxin from aquifex aeolicus
Author: a. p. yeh, c. chatelet, s. m. soltis, p. kuhn, j. meyer, d. c. rees
Keywords: [2fe-2s] cluster, thioredoxin fold
- 1gb7.pdb.
hydrolase 26-jun-00 1gb7
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1gbw.pdb.
hydrolase 26-jun-00 1gbw
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1c8g.pdb.
virus/viral protein 05-may-00 1c8g
Ca
Title: feline panleukopenia virus empty capsid structure
Author: m. g. rossmann, a. a. simpson
Keywords: protein-dna complex, double complex
- 1c77.pdb.
hydrolase 01-feb-00 1c77
Title: staphylokinase (sak) dimer
Author: z. rao, f. jiang, y. liu, x. zhang, y. chen, m. bartlam, h. song, y. ding
- 1c07.pdb.
signaling protein 14-jul-99 1c07
Ca
(NMR, 20 structures)
Title: structure of the third eps15 homology domain of human eps15
Author: j. l. enmon, t. de beer, m. overduin
Keywords: signaling domain, npf binding, fw binding, ef-hand, eh domain, signaling protein
- 1c0w.pdb.
gene regulation/dna 22-jul-99 1c0w
Co
Title: crystal structure of the cobalt-activated diphtheria toxin repressor-dna complex reveals a metal binding sh-like domain
Author: e. pohl, r. k. holmes, w. g. hol
Keywords: metal binding sh-like domain
- 1c1w.pdb.
blood clotting 21-jul-99 1c1w
Zn Na
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor
- 1c2g.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2g
Mg Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1qfg.pdb.
metal transport 10-apr-99 1qfg
Ni
Title: e. coli ferric hydroxamate receptor (fhua)
Author: a. d. ferguson, w. welte, e. hofmann, b. lindner, o. holst, j. w. coulton, k. diederichs
Keywords: integral outer membrane protein, ferrichrome-iron receptor, active transport, iron transport protein, lipopolysaccharide
- 1dv8.pdb.
signaling protein 20-jan-00 1dv8
Cl Ca
Title: crystal structure of the carbohydrate recognition domain of the h1 subunit of the asialoglycoprotein receptor
Author: m. meier, m. d. bider, v. n. malashkevich, m. spiess, p. burkhard
- 1edx.pdb.
ion transport 28-jan-00 1edx
(NMR)
Title: solution structure of amino terminus of bovine rhodopsin (residues 1-40)
Author: p. l. yeagle, a. salloum, a. chopra, n. bhawsar, l. ali
- 1evx.pdb.
hydrolase 20-apr-00 1evx
Zn
Title: apo crystal structure of the homing endonuclease, i-ppoi
Author: e. a. galburt, m. s. jurica, b. s. chevalier, d. erho, b. l. stoddard
- 1epx.pdb.
lyase 29-mar-00 1epx
Title: crystal structure analysis of aldolase from l. mexicana
Author: d. m. chudzik, p. a. michels, s. de walque, w. g. j. hol
Keywords: pts signal, aldolase, leishmania, fructose-1,6- bisphosphate
- 1fb8.pdb.
signaling protein 14-jul-00 1fb8
Title: structure of the pleckstrin homology domain from dapp1/phish
Author: k. m. ferguson, j. m. kavran, v. g. sankaran, e. fournier, s. j. isakoff, e. y. skolnik, m. a. lemmon
Keywords: 3-phosphoinositides, inositol tetrakisphosphate signal transduction protein, adaptor protein
- 1f8x.pdb.
transferase 05-jul-00 1f8x
Title: crystal structure of nucleoside 2-deoxyribosyltransferase
Author: s. r. armstrong, w. j. cook, s. a. short, s. e. ealick
Keywords: alpha/beta protein, biocatalyst, nucleoside, x- ray crystallography
- 1f98.pdb.
signaling protein 07-jul-00 1f98
Title: crystal structure of the photoactive yellow protein mutant t50v
Author: r. brudler, t. e. meyer, u. k. genick, g. tollin, e. d. getzoff
Keywords: light-sensor for negative phototaxis
- 1f4x.pdb.
immune system 10-jun-00 1f4x
Title: crystal structure of an anti-carbohydrate antibody directed against vibrio cholerae o1 in complex with antigen
Author: p. m. alzari, h. souchon
- 1f6h.pdb.
oxygen storage/transport 21-jun-00 1f6h
Nd Fe
(x-ray powder diffraction)
Title: combined rietveld and stereochemical restraint refinement of a protein
Author: r. b. von dreele
Keywords: rietveld refinement, myoblobin(met)
- 1gb8.pdb.
hydrolase 26-jun-00 1gb8
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1gbx.pdb.
hydrolase 26-jun-00 1gbx
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
- 1c8h.pdb.
virus/viral protein 05-may-00 1c8h
Ca
Title: canine parvovirus strain d empty capsid structure at ph 5.5
Author: m. g. rossmann, a. a. simpson
Keywords: viral capsid, icosahedral symmetry
- 1c9h.pdb.
immune system 02-aug-99 1c9h
Title: crystal structure of fkbp12.6 in complex with rapamycin
Author: c. c. s. deivanayagam, m. carson, a. thotakura, s. v. l. narayana, c. s. chodavarapu
Keywords: rapamycin, complex, ryanodine receptor
- 1c78.pdb.
hydrolase 01-feb-00 1c78
Title: staphylokinase (sak) dimer
Author: z. rao, f. jiang, y. liu, x. zhang, y. chen, m. bartlam, h. song, y. ding
- 1c08.pdb.
immune system/hydrolase 15-jul-99 1c08
Title: crystal structure of hyhel-10 fv-hen lysozyme complex
Author: m. shiroishi, h. kondo, m. matsushima, k. tsumoto, i. kumagai
- 1c2h.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2h
Mg Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1dwy.pdb.
prion protein 15-dec-99 1dwy
(NMR, representative minimized structure)
Title: bovine prion protein fragment 121-230
Author: f. lopez-garcia, r. zahn, r. riek, m. billeter, k. wuthrich
Keywords: brain, repeat
- 1ds9.pdb.
contractile protein 07-jan-00 1ds9
(NMR, 17 structures)
Title: solution structure of chlamydomonas outer arm dynein light chain 1
Author: h. w. wu, m. w. maciejewski, a. marintchev, s. e. benashski, g. p. mullen, s. m. king
Keywords: beta-beta-alpha cylinder, dynein, chlamydomonas, flagella
- 1em9.pdb.
virus/viral protein 16-mar-00 1em9
Mg
Title: rous sarcoma virus capsid protein: n-terminal domain
Author: r. l. kingston, t. fitzon-ostendorp, e. z. eisenmesser, g. w. schatz, v. m. vogt, c. b. post, m. g. rossmann
- 1eii.pdb.
transport protein 25-feb-00 1eii
(NMR, 25 structures)
Title: nmr structure of holo cellular retinol-binding protein ii
Author: j. lu, c. l. lin, c. tang, j. w. ponder, j. l. kao, d. p. cistola, e. li
Keywords: beta barrel, helix-turn-helix
- 1ej9.pdb.
isomerase/dna 01-mar-00 1ej9
Title: crystal structure of human topoisomerase i dna complex
Author: m. r. redinbo, j. j. champoux, w. g. hol
Keywords: type i topoisomerase, human
- 1e4y.pdb.
transferase(phosphotransferase) 12-jul-00 1e4y
Title: mutant p9l of adenylate kinase from e. coli, modified in the gly-loop
Author: c. w. mueller, g. e. schulz
- 1fby.pdb.
transcription 17-jul-00 1fby
Title: crystal structure of the human rxr alpha ligand binding domain bound to 9-cis retinoic acid
Author: p. f. egea, a. mitschler, n. rochel, m. ruff, p. chambon, d. moras
Keywords: protein-ligand complex, retinoid receptor
- 1f9i.pdb.
signaling protein 10-jul-00 1f9i
Title: crystal structure of the photoactive yellow protein mutant y42f
Author: r. brudler, t. e. meyer, u. k. genick, g. tollin, e. d. getzoff
Keywords: light-sensor for negative phototaxis
- 1f4y.pdb.
immune system 10-jun-00 1f4y
Title: crystal structure of an anti-carbohydrate antibody directed against vibrio cholerae o1 in complex with antigen
Author: p. m. alzari, h. souchon
- 1f29.pdb.
hydrolase 23-may-00 1f29
Title: crystal structure analysis of cruzain bound to a vinyl sulfone derived inhibitor (i)
Author: l. s. brinen, e. hansell, w. r. roush, j. h. mckerrow, r. j. fletterick
- 1f39.pdb.
virus/viral protein 01-jun-00 1f39
Title: crystal structure of the lambda repressor c-terminal domain
Author: c. e. bell, p. frescura, a. hochschild, m. lewis
Keywords: reca-mediated self-cleavage, gene regulation
- 1f3i.pdb.
transcription/dna 03-jun-00 1f3i
Mn
Title: crystal structure of tn5 transposase complexed with transposon end dna
Author: d. r. davies, i. y. goryshin, w. s. reznikoff, i. rayment
Keywords: ribonuclease h-like motif, protein-dna complex, synaptic complex
- 1gb9.pdb.
hydrolase 26-jun-00 1gb9
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1gby.pdb.
hydrolase 26-jun-00 1gby
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1c79.pdb.
hydrolase 01-feb-00 1c79
Title: staphylokinase (sak) dimer
Author: z. rao, f. jiang, y. liu, x. zhang, y. chen, m. bartlam, h. song, y. ding
- 1c7y.pdb.
dna-binding protein/dna 03-apr-00 1c7y
Title: e.coli ruva-holliday junction complex
Author: m. ariyoshi, t. nishino, h. iwasaki, h. shinagawa, k. morikawa
Keywords: protein-dna complex, homologous recombination, holliday junction
- 1c2i.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2i
Cl Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1c3i.pdb.
hydrolase 27-jul-99 1c3i
Zn Ca
Title: human stromelysin-1 catalytic domain complexed with ro-26- 2812
Author: d. l. steele, r. u. kammlott, r. l. crowther, j. j. birktoft, p. dunten, j. e. engler
Keywords: site mutant (glu202-gln)
- 1qo9.pdb.
hydrolase 07-nov-99 1qo9
Title: native acetylcholinesterase from drosophila melanogaster
Author: m. harel, i. silman, j. l. sussman
Keywords: hydrolase, serine esterase, synapse, membrane, nerve, muscle, signal, neurotransmitter degradation, glycoprotein, gpi-anchor, alternative splicing
- 1dwz.pdb.
prion protein 15-dec-99 1dwz
(NMR, 20 structures)
Title: bovine prion protein fragment 121-230
Author: f. lopez-garcia, r. zahn, r. riek, m. billeter, k. wuthrich
Keywords: brain, repeat
- 1eej.pdb.
isomerase 31-jan-00 1eej
Title: crystal structure of the protein disulfide bond isomerase, dsbc, from escherichia coli
Author: a. a. mccarthy, p. w. haebel, a. torronen, v. rybin, e. n. baker, p. metcalf
Keywords: protein disulfide isomerase, protein folding, redox protein, redox-active center
- 1eyz.pdb.
transferase 09-may-00 1eyz
Cl Mg Na
Title: structure of escherichia coli purt-encoded glycinamide ribonucleotide transformylase complexed with mg and amppnp
Author: j. b. thoden, s. firestine, a. nixon, s. j. benkovic, h. m. holden
Keywords: purine biosynthesis, atp-grasp
- 1erj.pdb.
transcription inhibitor 06-apr-00 1erj
Title: crystal structure of the c-terminal wd40 domain of tup1
Author: e. r. sprague, m. j. redd, a. d. johnson, c. wolberger
- 1e4j.pdb.
immune system 07-jul-00 1e4j
Title: crystal structure of the soluble human fc-gamma receptor iii
Author: p. sondermann, r. huber, u. jacob
Keywords: fc, receptor, cd16, gamma
- 1e1j.pdb.
prion protein 08-may-00 1e1j
(NMR, regularized mean structure)
Title: human prion protein variant m166v
Author: l. calzolai, d. a. lysek, p. guntert, c. von schroetter, r. zahn, r. riek, k. wuthrich
- 1e2z.pdb.
electron transport proteins 30-may-00 1e2z
Fe
Title: q158l mutant of cytochrome f from chlamydomonas reinhardtii
Author: g. sainz, c. j. carrell, m. v. ponamarev, g. m. soriano, w. a. cramer, j. l. smith
Keywords: photosynthetic function impaired
- 1f0j.pdb.
hydrolase 16-may-00 1f0j
Mg Zn As
Title: catalytic domain of human phosphodiesterase 4b2b
Author: r. x. xu, a. m. hassell, d. vanderwall, m. h. lambert, w. d. holmes, m. a. luther, w. j. rocque, m. v. milburn, y. zhao, h. ke, r. t. nolte
- 1f2j.pdb.
lyase 25-may-00 1f2j
Title: crystal structure analysis of aldolase from t. brucei
Author: d. m. chudzik, p. a. michels, s. de walque, w. g. j. hol
Keywords: pts signal, aldolase, trypanosoma, fructose 1, 6 bisphosphate
- 1gfz.pdb.
transferase 29-jun-00 1gfz
Title: flavopiridol inhibits glycogen phosphorylase by binding at the inhibitor site
Author: n. g. oikonomakos, s. e. zographos, v. t. skamnaki, k. e. tsitsanou, l. n. johnson
Keywords: glycogen metabolism, diabetes, flavopiridol, inhibitor site
- 1gaz.pdb.
hydrolase 26-jun-00 1gaz
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1gbz.pdb.
hydrolase 26-jun-00 1gbz
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
Keywords: hydrolase
- 1c2j.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2j
Mg Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1qsj.pdb.
immune system 22-jun-99 1qsj
Title: n-terminally truncated c3dg fragment
Author: g. zanotti, a. bassetto, r. battistutta, m. stoppini, c. folli, r. berni
- 1eok.pdb.
hydrolase 23-mar-00 1eok
Title: crystal structure of endo-beta-n-acetylglucosaminidase f3
Author: c. a. waddling, t. h. plummer jr. , a. l. tarentino, p. van roey
- 1ebk.pdb.
hydrolase/hydrolase inhibitor 24-jan-00 1ebk
Title: structural and kinetic analysis of drug resistant mutants of hiv-1 protease
Author: b. mahalingam, j. m. louis, c. c. reed, j. m. adomat, j. krouse, y. f. wang, r. w. harrison, i. t. weber
Keywords: mutant, dimer, inhibitor
- 1exk.pdb.
chaperone 03-may-00 1exk
Zn
(NMR, 20 structures)
Title: solution structure of the cysteine-rich domain of the escherichia coli chaperone protein dnaj.
Author: m. martinez-yamout, g. b. legge, o. zhang, p. e. wright, h. j. dyson
Keywords: cxxcxgxg, zinc-binding motif
- 1evk.pdb.
ligase 20-apr-00 1evk
Zn
Title: crystal structure of a truncated form of threonyl-trna synthetase with the ligand threonine
Author: r. sankaranarayanan, a. c. dock-bregeon, b. rees, d. moras
Keywords: threonine, zinc ion, deletion mutant
- 1e4k.pdb.
complex 07-jul-00 1e4k
Title: crystal structure of soluble human igg1 fc fragment-fc-gamma receptor iii complex
Author: p. sondermann, r. huber, v. oosthuizen, u. jacob
Keywords: fc fragment, igg, fc, receptor, cd16, gamma
- 1f0k.pdb.
transferase 16-may-00 1f0k
Title: the 1.9 angstrom crystal structure of e. coli murg
Author: s. ha, d. walker, y. shi, s. walker
- 1c2k.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2k
Cl Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease/inhibitor, hydrolase/hydrolase inhibitor
- 1qkk.pdb.
transcriptional regulatory protein 21-jul-99 1qkk
Title: crystal structure of the receiver domain and linker region of dctd from sinorhizobium meliloti
Author: m. g. meyer, b. t. nixon, m. a. staley, r. d. kidd, l. c. zeringue, g. k. farber
Keywords: 2-component signal transduction, sigma-54 dependent transcriptional activator, bacterial enhancer binding protein, high solvent content crystal
- 1dkl.pdb.
hydrolase 08-dec-99 1dkl
Title: crystal structure of escherichia coli phytase at ph 4.5 (no ligand bound)
Author: d. lim, s. golovan, c. w. forsberg, z. jia
- 1evl.pdb.
ligase 20-apr-00 1evl
Zn
Title: crystal structure of a truncated form of threonyl-trna synthetase with a threonyl adenylate analog
Author: r. sankaranarayanan, a. c. dock-bregeon, b. rees, d. moras
Keywords: zinc ion, trna-synthetase, adenylate analog, deletion mutant
- 1ffl.pdb.
transferase 25-jul-00 1ffl
Title: crystal structure of the apo-thymidylate synthase r166q mutant
Author: r. r. sotelo-mundo, s. a. roberts, f. maley, w. r. montfort
Keywords: methyltransferase
- 1f9l.pdb.
ribonucleic acid 11-jul-00 1f9l
Ho
(NMR, minimized average structure)
Title: solution structure of a 22-nucleotide hairpin similar to the p5abc region of a group i ribozyme with cobalt(iii) hexammine complexed to the gaaa tetraloop
Author: s. ruedisser, i. tinoco jr.
Keywords: gaaa tetraloop, metal-ion binding, cobalt(iii)hexammine, hairpin, p5abc, group i intron
- 1c4l.pdb.
ribonucleic acid 30-aug-99 1c4l
(NMR, minimized average structure)
Title: solution structure of an rna duplex including a c-u base- pair
Author: y. tanaka, c. kojima, t. yamazaki, t. s. kodama, k. yasuno, s. miyashita, a. m. ono, a. s. ono, m. kainosho, y. kyogoku
- 1c2l.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2l
Cl Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease, hydrolase/hydrolase inhibitor
- 1dkm.pdb.
hydrolase 08-dec-99 1dkm
Hg
Title: crystal structure of escherichia coli phytase at ph 6.6 with hg2+ cation acting as an intermolecular bridge
Author: d. lim, s. golovan, c. w. forsberg, z. jia
- 1eom.pdb.
hydrolase 23-mar-00 1eom
Title: crystal structure of the complex of endo-beta-n- acetylglucosaminidase f3 with a biantennary complex octasaccharide
Author: c. a. waddling, t. h. plummer jr. , a. l. tarentino, p. van roey
- 1fbm.pdb.
cell adhesion 16-jul-00 1fbm
Title: assembly domain of cartilage oligomeric matrix protein in complex with all-trans retinol
Author: y. guo, d. bozic, v. n. malashkevich, r. a. kammerer, t. schulthess
Keywords: assembly domain, cartilage, oligomeric matrix protein, glycoprotein, assembly domain, cartilage, retinol-complex
- 1c7m.pdb.
electron transport 03-mar-00 1c7m
Fe
(NMR, 20 structures)
Title: solution structure of the functional domain of paracoccus denitrificans cytochrome c552 in the reduced state
Author: p. pristovsek, c. luecke, b. reincke, b. ludwig, h. rueterjans
Keywords: cytochrome c552, heme, redox states, isotope enrichment {15n}, nmr spectroscopy, solution structure
- 1c2m.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c2m
Mg Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease, hydrolase/hydrolase inhibitor
- 1qkm.pdb.
nuclear receptor 27-jul-99 1qkm
Title: human oestrogen receptor beta ligand-binding domain in complex with partial agonist genistein
Author: a. c. w. pike, a. m. brzozowski, m. carlquist
Keywords: transcription factor, phyto-oestrogen, partial agonist
- 1dkn.pdb.
hydrolase 08-dec-99 1dkn
Hg
Title: crystal structure of escherichia coli phytase at ph 5.0 with hg2+ cation acting as an intermolecular bridge
Author: d. lim, s. golovan, c. w. forsberg, z. jia
- 1dqn.pdb.
transferase 04-jan-00 1dqn
Mg
Title: crystal structure of giardia guanine phosphoribosyltransferase complexed with a transition state analogue
Author: w. shi, n. r. munagala, c. c. wang, c. m. li, p. c. tyler, r. h. furneaux, c. grubmeyer, v. l. schramm, s. c. almo
Keywords: mg ions, pyrophosphate, transition state analogue
- 1c7n.pdb.
transferase 16-mar-00 1c7n
Title: crystal structure of cystalysin from treponema denticola contains a pyridoxal 5'-phosphate cofactor
Author: h. i. krupka, r. huber, s. c. holt, t. clausen
Keywords: aminotransferase, pyridoxal phosphate
- 1c0n.pdb.
lyase 17-jul-99 1c0n
Title: csdb protein, nifs homologue
Author: t. fujii, m. maeda, h. mihara, t. kurihara, n. esaki, y. hata
- 1c1n.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c1n
Zn Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease, hydrolase/hydrolase inhibitor
- 1qon.pdb.
hydrolase (serine esterase) 15-nov-99 1qon
I
Title: ache from drosophila melanogaster complex with tacrine derivative 9-(3-iodobenzylamino)-1,2,3,4-tetrahydroacridine
Author: m. harel, i. silman, j. l. sussman
Keywords: hydrolase, serine esterase, synapse, membrane, nerve, muscle, signal, neurotransmitter degradation, glycoprotein, gpi-anchor, alternative splicing
- 1qkn.pdb.
nuclear receptor 27-jul-99 1qkn
Title: rat oestrogen receptor beta ligand-binding domain in complex with antagonist raloxifene
Author: a. c. w. pike, a. m. brzozowski, m. carlquist
Keywords: transcription factor, antagonist
- 3cao.pdb.
electron transport 17-nov-98 3cao
Zn Fe As
Title: oxidised structure of the acidic cytochrome c3 from desulfovibrio africanus
Author: s. norager, p. legrand, l. pieulle, c. hatchikian, m. roth
Keywords: tetraheme, oxidised form, electron transport, desulfovibrio africanus
- 1dko.pdb.
hydrolase 08-dec-99 1dko
Hg W
Title: crystal structure of tungstate complex of escherichia coli phytase at ph 6.6 with tungstate bound at the active site and with hg2+ cation acting as an intermolecular bridge
Author: d. lim, s. golovan, c. w. forsberg, z. jia
- 1dvo.pdb.
transcription 21-jan-00 1dvo
Title: the x-ray crystal structure of fino, a repressor of bacterial conjugation
Author: a. f. ghetu, m. j. gubbins, l. s. frost, j. n. m. glover
Keywords: bacterial conjugation, x-ray crystallography
- 1e1o.pdb.
ligase 09-may-00 1e1o
Title: lysyl-trna synthetase (lysu) hexagonal for, complexed with lys
Author: g. desogus, f. todone, p. brick, s. onesti
Keywords: aminoacyl-trna synthetase, protein biosynthesis
- 1fao.pdb.
signaling protein 13-jul-00 1fao
Title: structure of the pleckstrin homology domain from dapp1/phish in complex with inositol 1,3,4,5- tetrakisphosphate
Author: k. m. ferguson, j. m. kavran, v. g. sankaran, e. fournier, s. j. isakoff, e. y. skolnik, m. a. lemmon
Keywords: 3-phosphoinositides, inositol tetrakisphosphate signal transduction protein, adaptor protein
- 1fbo.pdb.
hydrolase 16-jul-00 1fbo
Ca
Title: crystal structure of the cellulase cel48f from c. cellulolyticum in complex with cellobiitol
Author: g. parsiegla, c. reverbel-leroy, c. tardif, j. p. belaich, h. driguez, r. haser
Keywords: protein-cellobiitol complex
- 1f9o.pdb.
hydrolase/hydrolase inhibitor 11-jul-00 1f9o
I Ca
Title: crystal structure of the cellulase cel48f from c. cellulolyticum with the thiooligosaccharide inhibitor pips- ig3
Author: g. parsiegla, c. reverbel-leroy, c. tardif, j. p. belaich, h. driguez, r. haser
Keywords: thiooligosaccharide, protein-inhibitor complex
- 1gbo.pdb.
hydrolase 26-jun-00 1gbo
Na
Title: crystal structure of mutant human lysozyme substituted at the surface positions
Author: j. funahashi, k. takano, y. yamagata, k. yutani
- 1c4o.pdb.
replication 14-sep-99 1c4o
Title: crystal structure of the dna nucleotide excision repair enzyme uvrb from thermus thermophilus
Author: m. machius, l. henry, m. palnitkar, j. deisenhofer
Keywords: uvrabc, helicase, hyperthermostable protein
- 1c7o.pdb.
transferase 16-mar-00 1c7o
Title: crystal structure of cystalysin from treponema denticola contains a pyridoxal 5'-phosphate-l-aminoethoxyvinylglycine complex
Author: h. i. krupka, r. huber, s. c. holt, t. clausen
Keywords: aminotransferase
- 1c1o.pdb.
hydrolase/hydrolase inhibitor 21-jul-99 1c1o
Mg Ca
Title: recruiting zinc to mediate potent, specific inhibition of serine proteases
Author: b. a. katz, c. luong
Keywords: ph dependence, zn(ii) affinity stucture-based drug design, serine protease serine protease/inhibitor, hydrolase/hydrolase inhibitor
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