Recent PDB releases or updates: week of 12 July 2000

• 1dz0.pdb. electron transport (cuproprotein) 11-feb-00 1dz0 Cu
  Title: reduced azurin ii from alcaligenes xylosoxidans
  Author: f. e. dodd, z. h. l. abraham, r. r. eady, s. s. hasnain
  Keywords: cupredoxin, copper, periplasmic
  
• 1ds0.pdb. oxidoreductase,lyase 06-jan-00 1ds0
  Title: crystal structure of clavaminate synthase
  Author: z. h. zhang, j. ren, d. k. stammers, j. e. baldwin, k. harlos, c. j. schofield
  Keywords: trifunctional enzyme, clavaminate synthase 1, jelly roll
  
• 1f00.pdb. cell adhesion 12-may-00 1f00
  Title: crystal structure of c-terminal 282-residue fragment of enteropathogenic e. coli intimin
  Author: y. luo, e. a. frey, r. a. pfuetzner, a. l. creagh, d. g. knoechel, c. a. haynes, b. b. finlay, n. c. j. strynadka
  Keywords: c-type lectin-like fold
  
• 1qe0.pdb. ligase 12-jul-99 1qe0
  Title: crystal structure of apo s. aureus histidyl-trna synthetase
  Author: x. qiu, c. a. janson, m. n. blackburn, i. k. chohan, m. hibbs, s. s. abdel- meguid
  Keywords: beta sheet
  
• 1ds1.pdb. oxidoreductase,lyase 06-jan-00 1ds1 Fe
  Title: crystal structure of clavaminate synthase in complex with fe(ii) and 2-oxoglutarate
  Author: z. h. zhang, j. ren, d. k. stammers, j. e. baldwin, k. harlos, c. j. schofield
  Keywords: trifunctional enzyme, clavaminate synthase 1
  
• 1e3q.pdb. serine hydrolase 20-jun-00 1e3q
  Title: torpedo californica acetylcholinesterase complexed with bw284c51
  Author: c. e. felder, m. harel, i. silman, j. l. sussman
  Keywords: bw284c51, acetylcholinesterase, hydrolase, inhibitor
  
• 1qdq.pdb. hydrolase 10-jul-99 1qdq
  Title: x-ray crystal structure of bovine cathepsin b-ca074 complex
  Author: a. yamamoto
  Keywords: papain, cathepsin b-specific inhibitor complex
  
• 1f02.pdb. cell adhesion 14-may-00 1f02
  Title: crystal structure of c-terminal 282-residue fragment of intimin in complex with translocated intimin receptor (tir) intimin-binding domain
  Author: y. luo, e. a. frey, r. a. pfuetzner, a. l. creagh, d. g. knoechel, c. a. haynes, b. b. finlay, n. c. j. strynadka
  Keywords: c-type lectin-like fold, four- helix bundle
  
• 1qe2.pdb. transferase 12-jul-99 1qe2 Zn (theoretical model)
  Title: theoretical substrate-free zinc-bound farnesyltransferase generated by molecular dynamics simulations
  Author: y. p. pang, k. xu, f. g. prendergast
  Keywords: theoretical structure, molecular dynamics simulation
  
• 1d3s.pdb. transport protein 30-sep-99 1d3s Fe
  Title: 1.4 a crystal structure of nitrophorin 4 from rhodnius prolixis at ph=5.6.
  Author: a. weichsel, j. f. andersen, s. a. roberts, w. r. montfort
  Keywords: ferric heme, antihistamine, vasodilator, lipocalin,
  
• 1qd3.pdb. ribonucleic acid 07-jul-99 1qd3 (NMR, 17 structures)
  Title: hiv-1 tar rna/neomycin b complex
  Author: c. faber, h. sticht, p. roesch
  Keywords: hiv-1, aminoglycoside-rna-complex, minor groove binding
  
• 1dtd.pdb. hydrolase/hydrolase inhibitor 12-jan-00 1dtd Zn
  Title: crystal structure of the complex between the leech carboxypeptidase inhibitor and the human carboxypeptidase a2 (lci-cpa2)
  Author: d. reverter, c. fernandez-catalan, w. bode, t. a. holak, f. x. aviles
  Keywords: leech carboxypeptidase inhibitor
  
• 1dp4.pdb. hormone/growth factor receptor, lyase 23-dec-99 1dp4 Cl
  Title: dimerized hormone binding domain of the atrial natriuretic peptide receptor
  Author: f. van den akker, v. c. yee
  Keywords: dimer
  
• 1drt.pdb. oxidoreductase,lyase 06-jan-00 1drt Fe
  Title: crystal structure of clavaminate synthase in complex with fe(ii), 2-oxoglutarate and proclavaminic acid
  Author: z. h. zhang, j. ren, d. k. stammers, j. e. baldwin, k. harlos, c. j. schofield
  Keywords: trifunctional enzyme, clavaminate synthase 1
  
• 1e2t.pdb. transferase 24-may-00 1e2t
  Title: arylamine n-acetyltransferase (nat) from salmonella typhimurium
  Author: j. c. sinclair, j. sandy, r. delgoda, e. sim, m. e. m. noble
  Keywords: acetyl coa dependent
  
• 1qnd.pdb. transfer protein 14-oct-99 1qnd (NMR, 20 structures)
  Title: sterol carrier protein-2, nmr, 20 structures
  Author: f. lopez-garcia, t. szyperski, j. h. dyer, t. choinowski, u. seedorf, h. helmut, k. wuthrich
  Keywords: protein structure, protein dynamics, nitroxide spin labels, lipid binding
  
• 1c8u.pdb. hydrolase 29-jul-99 1c8u
  Title: crystal structure of the e.coli thioesterase ii, a homologue of the human nef-binding enzyme
  Author: j. li, z. s. derewenda
  
  
• 1qdu.pdb. hydrolase 10-jul-99 1qdu
  Title: crystal structure of the complex of caspase-8 with the tripeptide ketone inhibitor zevd-dcbmk
  Author: h. blanchard, m. g. grutter
  Keywords: cysteine-protease
  
• 1dov.pdb. cell adhesion 21-dec-99 1dov
  Title: crystal structure of the alpha-catenin dimerization domain
  Author: s. pokutta, w. i. weis
  
  
• 1ds6.pdb. signaling protein 07-jan-00 1ds6 Mg
  Title: crystal structure of a rac-rhogdi complex
  Author: k. scheffzek, i. stephan, o. n. jensen, d. illenberger, p. gierschik
  Keywords: protein-protein complex, g-domain, immunoglobulin fold, walker fold, gtp-binding protein
  
• 1ej6.pdb. virus/viral protein 29-feb-00 1ej6 Zn
  Title: reovirus core
  Author: k. m. reinisch, m. l. nibert, s. c. harrison
  Keywords: icosahedral, non-equivalence, dsrna virus, methylase, methyltransferase, guanylyltransferase, zinc finger
  
• 1f2f.pdb. transferase 24-may-00 1f2f
  Title: src sh2 thref1trp mutant
  Author: m. s. kimber, j. nachman, a. m. cunningham, g. d. gish, t. pawson, e. f. pai
  Keywords: sh2 domain, specificity switch
  
• 1scf.pdb. hormone/growth factor 04-jun-98 1scf Ca Se
  Title: human recombinant stem cell factor
  Author: x. jiang, o. gurel, k. e. langley, w. a. hendrickson
  Keywords: steel factor, kit ligand, mast cell growth factor
  
• 1dow.pdb. cell adhesion 21-dec-99 1dow Se
  Title: crystal structure of a chimera of beta-catenin and alpha- catenin
  Author: s. pokutta, w. i. weis
  
  
• 1ds7.pdb. oxidoreductase 07-jan-00 1ds7
  Title: a minor fmn-dependent nitroreductase from escherichia coli b
  Author: g. parkinson, j. skelly, s. neidle
  Keywords: fmn, nitroreductase, flavoprotein
  
• 1f1w.pdb. transferase 20-may-00 1f1w
  Title: src sh2 thref1trp mutant complexed with the phosphopeptide s(ptr)vnvqn
  Author: m. s. kimber, j. nachman, a. m. cunningham, g. d. gish, t. pawson, e. f. pai
  Keywords: sh2 domain, phosphopeptide, specificity switch
  
• 1qu7.pdb. signaling protein 07-jul-99 1qu7
  Title: four helical-bundle structure of the cytoplasmic domain of a serine chemotaxis receptor
  Author: k. k. kim, h. yokota, s. -h. kim
  Keywords: chemotaxis, four helical-bundle
  
• 1dk8.pdb. signaling protein 06-dec-99 1dk8
  Title: crystal structure of the rgs-homologous domain of axin
  Author: k. e. spink, p. polakis, w. i. weis
  Keywords: pi-helix
  
• 1qoh.pdb. toxin 07-nov-99 1qoh
  Title: a mutant shiga-like toxin iie
  Author: n. s. pannu, a. boodhoo, g. d. armstrong, c. g. clark, j. l. brunton, r. j. read
  Keywords: receptor binding, protein-carbohydrate recognition, specificity
  
• 1qdx.pdb. oxidoreductase 11-jul-99 1qdx Fe
  Title: crystal structure of v61h mutant of cytochrome b5
  Author: l. -l. xue, y. -h. wang, y. xie, p. yao, w. -h. wang, w. qian, z. -x. huang, j. wu, z. -x. xia
  
  
• 1dqy.pdb. immune system 05-jan-00 1dqy
  Title: crystal structure of antigen 85c from mycobacterium tuberculosis with diethyl phosphate inhibitor
  Author: d. r. ronning, t. klabunde, j. c. sacchettini
  Keywords: 85c, mycobacterium tuberculosis, fibronectin, dpi
  
• 1dry.pdb. oxidoreductase,lyase 06-jan-00 1dry Fe
  Title: crystal structure of clavaminate synthase in complex with fe(ii), 2-oxoglutarate and n-alpha-l-acetyl arginine
  Author: z. h. zhang, j. ren, d. k. stammers, j. e. baldwin, k. harlos, c. j. schofield
  Keywords: trifunctional enzyme, clavaminate synthase 1
  
• 1e19.pdb. transferase 28-apr-00 1e19 Mg
  Title: structure of the carbamate kinase-like carbamoyl phosphate synthetase from the hyperthermophilic archaeon pyrococcus furiosus bound to adp
  Author: s. ramon-maiques, a. marina, m. uriarte, i. fita, v. rubio
  Keywords: hyperthermophiles, adp site, phosphoryl group transfer, arginine metabolism
  
• 1qm9.pdb. ribonucleoprotein 22-sep-99 1qm9 (NMR, minimized average structure)
  Title: nmr, representative structure
  Author: m. r. conte, t. grune, s. curry, s. matthews
  Keywords: rnp, rna, spicing, translation
  
• 1dyz.pdb. electron transport (cuproprotein) 11-feb-00 1dyz Cu
  Title: oxidised azurin ii from alcaligenes xylosoxidans
  Author: f. e. dodd, z. h. l. abraham, r. r. eady, s. s. hasnain
  Keywords: cupredoxin, copper, periplasmic
  
• 1dqz.pdb. immune system 05-jan-00 1dqz
  Title: crystal structure of antigen 85c from mycobacterium tuberculosis
  Author: d. r. ronning, t. klabunde, j. c. sacchettini
  Keywords: 85c, mycobacterium tuberculosis, fibronectin
  
• 1dsz.pdb. transcription/dna 10-jan-00 1dsz Zn
  Title: structure of the rxr/rar dna-binding domain heterodimer in complex with the retinoic acid response element dr1
  Author: f. rastinejad, t. wagner, q. zhao, s. khorasanizadeh
  Keywords: rar, nuclear receptor, protein-dna, retinoic acid
  
• 1exz.pdb. hormone/growth factor 05-may-00 1exz Sm Ca
  Title: structure of stem cell factor
  Author: z. zhang, r. zhang, a. joachimiak, j. schlessinger, x. kong
  
  
• 1quz.pdb. toxin 05-jul-99 1quz (NMR, 20 structures)
  Title: solution structure of the potassium channel scorpion toxin hstx1
  Author: p. savarin, r. romi-lebrun, s. zinn-justin, b. lebrun, t. nakajima, b. gilquin, a. menez
  Keywords: alpha beta, nmr, molecular modeling, potassium channel
  
• 1dxl.pdb. oxidoreductase 10-jan-00 1dxl
  Title: dihydrolipoamide dehydrogenase of glycine decarboxylase from pisum sativum
  Author: m. faure, c. cohen-addad, j. bourguignon, d. macherel, m. neuburger, r. douce
  Keywords: multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex, flavoprotein
  
• 1dxm.pdb. oxidoreductases(acting on ch-nh2 donor) 10-jan-00 1dxm
  Title: reduced form of the h protein from glycine decarboxylase complex
  Author: m. faure, c. cohen-addad, m. neuburger, r. douce
  Keywords: mitochondria,
  
• 1dyo.pdb. carbohydrate-binding module 03-feb-00 1dyo Ca Se
  Title: xylan-binding domain from cbm 22, formally x6b domain
  Author: g. j. davies, s. j. charnock, h. j. gilbert, c. m. g. a. fontes
  Keywords: xylan-binding, xylanase