Recent PDB releases or updates: week of 23 February 2000

• 1do0.pdb. chaperone 18-dec-99 1do0
  Title: orthorhombic crystal form of heat shock locus u (hslu) from escherichia coli
  
  
  
• split.pdb. Mg
  
  Author: m. bochtler, c. hartmann, h. k. song, g. p. bourenkov, h. d. bartunik
  Keywords: clpy, aaa-atpase, atp-dependent proteolysis, atpase, proteasome
  
• 1db0.pdb. protein binding 01-nov-99 1db0 Ca
  Title: carboxy-terminal half of gelsolin (g4-g6) bound to actin
  Author: r. c. robinson, m. mejillano, v. p. le, l. d. burtnick, h. l. yin, s. choe
  Keywords: protein binding
  
• 1b60.pdb. deoxyribonucleic acid 20-jan-99 1b60 (NMR, minimized average structure)
  Title: 3,n4-etheno-2'-deoxycytidine opposite cytidine in an 11-mer duplex, solution structure from nmr and molecular dynamics
  Author: d. cullinan, f. johnson, c. de los santos
  Keywords: edc, exocyclic lesion
  
• 1dt1.pdb. oxidoreductase 10-jan-00 1dt1 Fe
  Title: thermus thermophilus cytochrome c552 synthesized by escherichia coli
  Author: j. a. fee, y. chen, m. j. hill, e. gomez-moran, t. loehr, j. ai, l. thony- meyer, p. a. williams, e. stura, v. sridhar, d. e. mcree
  Keywords: thermus thermophilus
  
• 1edq.pdb. oxidoreductase 28-jan-00 1edq
  Title: crystal structure of chitinase a from s. marcescens at 1.55 angstroms
  Author: y. papanikolau, k. petratos
  
  
• 1b91.pdb. transferase 17-feb-99 1b91 (NMR, 15 structures)
  Title: nmr structure of a histone acetyltranferase bromodomain
  Author: c. dhalluin, j. carlson, l. zeng, c. he, a. k. aggarwal, m. -m. zhou
  Keywords: histone-acetyltransferase, nmr-structure
  
• 1b61.pdb. oxidoreductase 20-jan-99 1b61 (theoretical model)
  Title: glutamyl trna reductase from hordeum vulgare, theoretical model
  Author: s. s. brody, s. gough, g. kannangara
  Keywords: chlorophyll synthesis, tetrapyrrole, oxidoreductase
  
• 1dl2.pdb. hydrolase 08-dec-99 1dl2 Ca
  Title: crystal structure of class i alpha-1,2-mannosidase from saccharomyces cerevisiae at 1.54 angstrom resolution
  Author: f. vallee, f. lipari, p. yip, a. herscovics, p. l. howell
  
  
• 1do2.pdb. chaperone 18-dec-99 1do2
  Title: trigonal crystal form of heat shock locus u (hslu) from escherichia coli
  Author: m. bochtler, c. hartmann, h. k. song, g. p. bourenkov, h. d. bartunik
  Keywords: clpy, aaa-atpase, atp-dependent proteolysis, proteasome
  
• 1b0b.pdb. oxygen storage/transport 06-nov-98 1b0b Fe
  Title: hemoglobin i from the clam lucina pectinata, cyanide complex at 100 kelvin
  Author: c. rosano, m. rizzi, p. ascenzi, m. bolognesi
  Keywords: sulfide carrier, globins, oxygen transport
  
• 1flc.pdb. hydrolase 22-feb-99 1flc
  Title: x-ray structure of the haemagglutinin-esterase-fusion glycoprotein of influenza c virus
  Author: p. b. rosenthal, x. zhang, f. formanowski, w. fitz, c. h. wong, h. meier- ewert, j. j. skehel, d. c. wiley
  Keywords: receptor binding, membrane fusion, virus, influenza, hydrolase
  
• 1cr3.pdb. deoxyribonucleic acid 12-aug-99 1cr3 (NMR, 7 structures)
  Title: solution conformation of the (+)trans-anti-benzo[g]chrysene- da adduct opposite dt in a dna duplex
  Author: a. k. suri, b. mao, s. amin, n. e. geacintov, d. j. patel
  Keywords: benzo[g]chrysene adduct, carcinogen adduct
  
• 1qac.pdb. immune system 25-feb-99 1qac
  Title: change in dimerization mode by removal of a single unsatisfied polar residue
  Author: p. r. pokkuluri, x. cai, g. johnson, f. j. stevens, m. schiffer
  Keywords: flipped domain dimer
  
• 454d.pdb. deoxyribonucleic acid 03-mar-99 454d Rh I
  Title: intercalation and major groove recognition in the 1.2 a resolution crystal structure of rh[me2trien]phi bound to 5'- g(5iu)tgcaac-3'
  Author: c. l. kielkopf, k. e. erkkila, b. p. hudson, j. k. barton, d. c. rees
  Keywords: intercalation, major groove recognition, photoexcitable
  
• 1c4t.pdb. transferase 22-sep-99 1c4t
  Title: catalytic domain from trimeric dihydrolipoamide succinyltransferase
  Author: j. e. knapp, d. carroll, j. e. lawson, s. r. ernst, l. j. reed, m. l. hackert
  Keywords: acyltransferase, ketoglutarate dehydrogenase multienzyme complex
  
• 5lve.pdb. immune system 24-feb-99 5lve Zn
  Title: structure of the variable domain of human immunoglobulin k- 4 light chain len
  Author: m. schiffer, d. -b. huang, c. -h. chang
  Keywords: bence-jones protein, immune system
  
• 1deu.pdb. hydrolase 15-nov-99 1deu
  Title: crystal structure of human procathepsin x: a cysteine protease with the proregion covalently linked to the active site cysteine
  Author: j. sivaraman, d. k. nagler, r. zhang, r. menard, m. cygler
  Keywords: cysteine protease, procathepsin x, proregion, prosegment
  
• 1ef5.pdb. signaling protein 07-feb-00 1ef5 (NMR, minimized average structure)
  Title: solution structure of the ras-binding domain of rgl
  Author: t. kigawa, m. endo, y. ito, m. shirouzu, a. kikuchi, s. yokoyama
  Keywords: rgl, ras, rbd, ra
  
• 1ca5.pdb. structural protein/dna 23-feb-99 1ca5
  Title: intercalation site of hyperthermophile chromosomal protein sso7d/sac7d bound to dna
  Author: s. su, y. -g. gao, h. robinson, j. w. shriver, a. h. -j. wang
  Keywords: chromosomal protein, sso7d, sac7d, dna binding
  
• 1ec6.pdb. rna binding protein/rna 25-jan-00 1ec6
  Title: crystal structure of nova-2 kh3 k-homology rna-binding domain bound to 20-mer rna hairpin
  Author: h. a. lewis, k. musunuru, k. b. jensen, c. edo, h. chen
  Keywords: alpha-beta fold, rna-binding motif, protein/rna structure
  
• 1bn6.pdb. hydrolase 31-jul-98 1bn6
  Title: haloalkane dehalogenase from a rhodococcus species
  Author: j. newman, t. s. peat, r. richard, l. kan, p. e. swanson, j. a. affholter, i. h. holmes, j. f. schindler, c. j. unkefer, t. c. terwilliger
  Keywords: alpha/beta-hydrolase, dhla, crystal structure
  
• 1ca6.pdb. structural protein/dna 23-feb-99 1ca6
  Title: intercalation site of hyperthermophile chromosomal protein sso7d/sac7d bound to dna
  Author: s. su, y. -g. gao, h. robinson, j. w. shriver, a. h. -j. wang
  Keywords: chromosomal protein, sso7d, sac7d, dna binding
  
• 1ylv.pdb. lyase 22-feb-99 1ylv Zn
  Title: schiff-base complex of yeast 5-aminolaevulinic acid dehydratase with laevulinic acid
  Author: p. t. erskine, r. newbold, j. roper, a. coker, m. j. warren, p. m. shoolingin-jordan, s. p. wood, j. b. cooper
  Keywords: aldolase, tim barrel, tetrapyrrole synthesis
  
• 1qcv.pdb. electron transport 10-may-99 1qcv (NMR 29 structures)
  Title: rubredoxin variant (pfrd-xc4) folds without iron
  Author: p. strop, s. l. mayo
  Keywords: rubredoxin, electron transport
  
• 1dgg.pdb. oxidoreductase 24-nov-99 1dgg Fe
  Title: human erythrocyte catalse cyanide complex
  Author: c. d. putnam, a. s. arvai, y. bourne, j. a. tainer
  Keywords: heme, nadph, hydrogen peroxide, cyanide
  
• 1d8g.pdb. deoxyribonucleic acid 23-oct-99 1d8g Ca
  Title: ultrahigh resolution crystal structure of b-dna decamer d(ccagtactgg)
  Author: c. l. kielkopf, s. ding, p. kuhn, d. c. rees
  Keywords: calcium, alternate conformation, ultrahigh resolution, trp repressor, polyamide
  
• 1bn7.pdb. hydrolase 31-jul-98 1bn7
  Title: haloalkane dehalogenase from a rhodococcus species
  Author: j. newman, t. s. peat, r. richard, l. kan, p. e. swanson, j. a. affholter, i. h. holmes, j. f. schindler, c. j. unkefer, t. c. terwilliger
  Keywords: alpha/beta-hydrolase, dhla, crystal structure
  
• 1dgh.pdb. oxidoreductase 24-nov-99 1dgh Fe
  Title: human erythrocyte catalase 3-amino-1,2,4-triazole complex
  Author: c. d. putnam, a. s. arvai, y. bourne, j. a. tainer
  Keywords: heme, nadph, hydrogen peroxide, 3-amino-1,2,4- triazole, inhibitor
  
• 2tli.pdb. hydrolase 28-oct-98 2tli Zn Ca
  Title: thermolysin (5% isopropanol soaked crystals)
  Author: a. c. english, s. h. done, c. r. groom, r. e. hubbard
  Keywords: metalloproteinase, organic solvent
  
• 3tli.pdb. hydrolase 28-oct-98 3tli Zn Ca
  Title: thermolysin (10% isopropanol soaked crystals)
  Author: a. c. english, s. h. done, c. r. groom, r. e. hubbard
  Keywords: metalloproteinase, organic solvent
  
• 1dm9.pdb. structural genomics 14-dec-99 1dm9
  Title: heat shock protein 15 kd
  Author: b. l. staker, p. korber, j. c. a. bardwell, m. a. saper
  Keywords: protein-rna interactions, ribosome, structural genomics
  
• 1dty.pdb. transferase 13-jan-00 1dty Na
  Title: crystal structure of adenosylmethionine-8-amino-7- oxonanoate aminotransferase with pyridoxal phosphate cofactor.
  Author: d. alexeev, l. sawyer, r. l. baxter, m. v. alexeeva, d. campopiano
  Keywords: dapa, diaminopelargonic acid, diaminonanonoic acid
  
• 1d2i.pdb. hydrolase 23-sep-99 1d2i Mg Se
  Title: crystal structure of restriction endonuclease bglii complexed with dna 16-mer
  Author: c. m. lukacs, r. kucera, i. schildkraut, a. k. aggarwal
  Keywords: restriction enzyme, protein-dna complex
  
• 1efi.pdb. toxin 08-feb-00 1efi
  Title: heat-labile enterotoxin b-pentamer complexed with para- aminophenyl-alpha-d-galactopyranoside
  Author: e. a. merritt, w. g. j. hol
  
  
• 1b2y.pdb. hydrolase 03-dec-98 1b2y Cl Ca
  Title: structure of human pancreatic alpha-amylase in complex with the carbohydrate inhibitor acarbose
  Author: v. nahoum, f. payan
  Keywords: crystal structure, acarbose
  
• 1cmi.pdb. oxidoreductase/oxidoreductase inhibitor 06-may-99 1cmi
  Title: structure of the human pin/lc8 dimer with a bound peptide
  Author: j. liang, w. guo, s. jaffery, s. snyder, j. clardy
  Keywords: lc8, nnos, dynein light chain
  
• 1cwy.pdb. transferase 27-aug-99 1cwy
  Title: crystal structure of amylomaltase from thermus aquaticus, a glycosyltransferase catalysing the production of large cyclic glucans
  Author: i. przylas, k. tomoo, y. terada, t. takaha, k. fuji, w. saenger, n. straeter
  Keywords: alpha)8 barrel, transferase
  
• 1tli.pdb. hydrolase 27-oct-98 1tli Zn Ca
  Title: thermolysin (2% isopropanol soaked crystals)
  Author: a. c. english, s. h. done, c. r. groom, r. e. hubbard
  Keywords: metalloproteinase, organic solvent
  
• 1ddj.pdb. blood clotting 10-nov-99 1ddj
  Title: crystal structure of human plasminogen catalytic domain
  Author: x. wang, s. terzyan, j. tang, j. loy, x. lin, x. zhang
  Keywords: catalytic domain
  
• 1dtj.pdb. immune system 12-jan-00 1dtj
  Title: crystal structure of nova-2 kh3 k-homology rna-binding domain
  Author: h. a. lewis, h. chen, c. edo, r. j. buckanovich, y. y. l. yang, k. musunuru, r. zhong, r. b. darnell, s. k. burley
  Keywords: alpha-beta fold rna-binding motif
  
• 1d6j.pdb. transferase 13-oct-99 1d6j
  Title: crystal structure of adenosine 5'-phosphosulfate (aps) kinase from penicillium chrysogenum
  Author: i. j. macrae, i. h. segel, a. j. fisher
  Keywords: adenylylsulfate kinase, sulfate, nucleotide kinase, transferase
  
• 1bxz.pdb. oxidoreductase 09-oct-98 1bxz Cl Mg Zn
  Title: crystal structure of a thermophilic alcohol dehydrogenase substrate complex from thermoanaerobacter brockii
  Author: c. li, j. heatwole, s. soelaiman, m. shoham
  Keywords: crystal structure
  
• 1b9l.pdb. isomerase 11-feb-99 1b9l
  Title: 7,8-dihydroneopterin triphosphate epimerase
  Author: t. ploom, c. haussmann, p. hof, s. steinbacher, a. bacher, j. richardson, r. huber
  
  
• 1dfm.pdb. hydrolase/dna 06-dec-99 1dfm Ca Se
  Title: crystal structure of restriction endonuclease bglii complexed with dna 16-mer
  Author: c. m. lukacs, r. kucera, i. schildkraut, a. k. aggarwal
  Keywords: restriction enzyme, protein-dna complex
  
• 1b3m.pdb. oxidoreductase 12-dec-98 1b3m
  Title: monomeric sarcosine oxidase from bacillus sp. b-0618
  Author: p. trickey, m. a. wagner, m. s. jorns, f. s. mathews
  
  
• 1doo.pdb. chaperone 21-dec-99 1doo
  Title: heat shock locus v (hslv) - heat shock locus u (hslu) from e. coli
  Author: m. bochtler, c. hartmann, h. k. song, g. p. bourenkov, h. d. bartunik
  Keywords: clpqy, aaa-atpase, atp-dependent proteolysis, proteasome
  
• 1dto.pdb. virus/viral protein 13-jan-00 1dto
  Title: crystal structure of the complete transactivation domain of e2 protein from the human papillomavirus type 16
  Author: a. a. antson, j. e. burns, o. v. moroz, d. j. scott, c. m. sanders, i. b. bronstein, g. g. dodson, k. s. wilson, n. maitland
  Keywords: beta-sheet