Recent PDB releases or updates: week of 9 February 2000
- 2mjp.pdb.
structural genomics 27-jan-99 2mjp
Title: structure-based identification of the biochemical function of a hypothetical protein from methanococcus jannaschii:mj0226
Author: k. y. hwang, j. h. chung, y. s. han, s. h. kim, y. cho
Keywords: pyrophosphatase, hyperthermal protein
- 2hlp.pdb.
oxidoreductase 23-apr-99 2hlp
Cl Na
Title: crystal structure of the e267r mutant of a halophilic malate dehydrogenase in the apo form
Author: s. b. richard, d. madern, e. garcin, g. zaccai
Keywords: ion-binding, salt bridges, malate dehydrogenase, oxidoreductase
- 1djp.pdb.
hydrolase 03-dec-99 1djp
Title: crystal structure of pseudomonas 7a glutaminase- asparaginase with the inhibitor don covalently bound in the active site
Author: e. a. ortlund, m. w. lacount, k. lewinski, l. lebioda
Keywords: glutaminase, asparaginase, don, 6-diazo-5-oxo-l- norvaline, glutaminase-asparaginase, suicide inhibitor, covalently bound inhibitor
- 1de0.pdb.
oxidoreductase 12-nov-99 1de0
Fe
Title: modulating the midpoint potential of the [4fe-4s] cluster of the nitrogenase fe protein
Author: s. b. jang, l. c. seefeldt, j. w. peters
Keywords: [fes] clusters, fe protein
- 1dq0.pdb.
sugar binding protein 29-dec-99 1dq0
Title: locked, metal-free concanavalin a, a minor species in solution
Author: j. bouckaert, y. dewallef, f. poortmans, l. wyns, r. loris
Keywords: solution, locked state, demetallized concanavalin a, beta-sheet
- 1d6p.pdb.
hydrolase 15-oct-99 1d6p
Title: human lysozyme l63 mutant labelled with 2',3'-epoxypropyl n, n'-diacetylchitobiose
Author: m. muraki, k. harata, n. sugita, k. sato
Keywords: muramidase, hydrolase (o-glycosyl), site-directed mutagenesis, n,n'-diacetylchitobiose, affinity labeling
- 1ed0.pdb.
toxin 26-jan-00 1ed0
(NMR, 10 structures)
Title: nmr structural determination of viscotoxin a3 from viscum album l.
Author: s. romagnoli, r. ugolini, f. fogolari, g. schaller, k. urech, m. giannattasio, l. ragona, h. molinari
Keywords: concentric motif, helix-turn-helix, alpha-beta protein, amphipathic helix
- 1b70.pdb.
ligase 26-jan-99 1b70
Mg
Title: phenylalanyl trna synthetase complexed with phenylalanine
Author: l. reshetnikova, n. moor, o. lavrik, d. g. vassylyev
Keywords: trna synthetase, dimer of alpha/beta heterodimers
- 1rep.pdb.
replication/dna 29-apr-99 1rep
Mg
Title: crystal structure of replication initiator protein repe54 of mini-f plasmid complexed with an iteron dna
Author: h. komori, f. matsunaga, y. higuchi, m. ishiai, c. wada, k. miki
Keywords: dna-binding,
- 2sta.pdb.
hydrolase/hydrolase inhibitor 10-dec-98 2sta
Ca
Title: anionic salmon trypsin in complex with squash seed inhibitor (cucurbita maxima trypsin inhibitor i)
Author: r. helland, g. i. berglund, j. otlewski, w. apostoluk, o. a. andersen, n. p. willassen, a. o. smalas
Keywords: trypsin inhibitor
- 1doa.pdb.
cell cycle 20-dec-99 1doa
Mg
Title: structure of the rho family gtp-binding protein cdc42 in complex with the multifunctional regulator rhogdi
Author: g. r. hoffman, n. nassar, r. c. cerione
Keywords: cdc42, rhogdi, x-ray
- 1ddq.pdb.
transcription 11-nov-99 1ddq
Mg Zn
Title: crystal structure of thermus aquaticus core rna polymerase at 3.3 a resolution
Author: g. zhang, e. a. campbell, l. minakhin, c. richter, k. severinov, s. a. darst
Keywords: transcription, dna-directed rna polymerase, 3d- structure
- 1deq.pdb.
blood clotting 15-nov-99 1deq
Title: the crystal structure of modified bovine fibrinogen (at ~4 angstrom resolution)
Author: j. h. brown, n. volkmann, g. jun, a. h. henschen-edman, c. cohen
- 1dga.pdb.
contractile protein 29-jan-99 1dga
Mg Ca
Title: structure of dictyostelium discoideum actin complexed with mg atp and human gelsolin segment 1.
Author: s. m. vorobiev, s. welti, j. condeelis, s. c. almo
Keywords: gelsolin, cytoskeleton organization, actin- associated protein
- 1dgq.pdb.
immune system 24-nov-99 1dgq
(NMR, 22 structures)
Title: nmr solution structure of the inserted domain of human leukocyte function associated antigen-1
Author: g. b. legge, r. w. kriwacki, j. chung, u. hommel, p. ramage, d. a. case, h. j. dyson, p. e. wright
- 1db1.pdb.
gene regulation 02-nov-99 1db1
Title: crystal structure of the nuclear receptor for vitamin d complexed to vitamin d
Author: n. rochel, j. m. wurtz, a. mitschler, b. klaholz, d. moras
- 1dq1.pdb.
sugar binding protein 29-dec-99 1dq1
Ca
Title: calcium;calcium concanavalin a
Author: j. bouckaert, y. dewallef, f. poortmans, l. wyns, r. loris
Keywords: leguminosae lectin, calcium, transition metal, ion binding site, s1, calcium binding site, s2
- 1drq.pdb.
transferase 06-jan-00 1drq
Fe
Title: crystal structure of the cyanide-bound bjfixl heme domain
Author: w. gong, b. hao, s. s. mansy, g. gonzalez, m. a. gilles-gonzalez, m. k. chan
Keywords: heme domain, crystal structure, pas family, two- component system, histidine kinase
- 1dsq.pdb.
virus/viral protein 08-jan-00 1dsq
Zn
(NMR, 20 structures)
Title: structure of the mmtv nucleocapsid protein (zinc finger 1)
Author: d. j. klein, p. e. johnson, e. s. zollars, r. n. de guzman, m. f. summers
- 1d6q.pdb.
hydrolase 15-oct-99 1d6q
Title: human lysozyme e102 mutant labelled with 2',3'-epoxypropyl glycoside of n-acetyllactosamine
Author: m. muraki, k. harata, n. sugita, k. sato
Keywords: muramidase, hydrolase (o-glycosyl), n- acetyllactosamine
- 1b71.pdb.
electron transport 26-jan-99 1b71
Zn Fe
Title: rubrerythrin
Author: l. c. sieker, m. holmes, i. le trong, s. turley, b. d. santarsiero, m. - y. liu, j. legall, r. e. stenkap
Keywords: iron, ferroxidase
- 1cq1.pdb.
oxidoreductase 04-aug-99 1cq1
Ca
Title: soluble quinoprotein glucose dehydrogenase from acinetobacter calcoaceticus in complex with pqqh2 and glucose
Author: a. oubrie, h. j. rozeboom, b. w. dijkstra
Keywords: superbarrel, complex with cofactor and substrate, oxidoreductase
- 1qma.pdb.
transport 23-sep-99 1qma
Title: nuclear transport factor 2 (ntf2) w7a mutant
Author: r. bayliss, k. ribbeck, d. akin, h. m. kent, c. m. feldherr, d. gorlich, m. j. stewart
- 1qna.pdb.
tata box-binding protein (tbp) 14-oct-99 1qna
Title: crystal structure of the t(-30) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complex, t(-30) tata box variant
- 1qkq.pdb.
serine esterase 30-jul-99 1qkq
Title: charcot-leyden crystal protein - mannose complex
Author: g. j. swaminathan, d. d. leonidas, k. r. acharya
Keywords: serine esterase, galectin-10
- 2stb.pdb.
hydrolase/hydrolase inhibitor 11-dec-98 2stb
Ca
Title: anionic salmon trypsin in complex with squash seed inhibitor (cucurbita pepo trypsin inhibitor ii)
Author: r. helland, g. i. berglund, j. otlewski, w. apostoluk, o. a. andersen, n. p. willassen, a. o. smalas
Keywords: trypsin inhibitor
- 1om2.pdb.
receptor/oxidoreductase complex 23-apr-99 1om2
(NMR, 20 structures)
Title: solution nmr structure of the mitochondrial protein import receptor tom20 from rat in a complex with a presequence peptide derived from rat aldehyde dehydrogenase (aldh)
Author: y. abe, t. shodai, t. muto, k. mihara, h. torii, s. nishikawa, t. endo, d. kohda
Keywords: receptor for presequences, mitochondrial targeting signal, presequence peptide
- 1dq2.pdb.
sugar binding protein 29-dec-99 1dq2
Title: unlocked metal-free concanavalin a
Author: j. bouckaert, y. dewallef, f. poortmans, l. wyns, r. loris
Keywords: lectin, metal-free, unlocked, concanavalin a
- 1dqr.pdb.
isomerase 05-jan-00 1dqr
Title: crystal structure of rabbit phosphoglucose isomerase, a glycolytic enzyme that moonlights as neuroleukin, autocrine motility factor, and differentiation mediator
Author: c. j. jeffery, b. j. bahnson, w. chien, d. ringe, g. a. petsko
Keywords: anti-parallel beta sheet, parallel beta sheet
- 1d5b.pdb.
immune system 06-oct-99 1d5b
Cd
Title: unliganded mature oxy-cope catalytic antibody
Author: e. c. mundorff, m. a. hanson, p. g. schultz, r. c. stevens
- 1b7b.pdb.
transferase 20-jan-99 1b7b
Title: carbamate kinase from enterococcus faecium
Author: a. marina, p. m. alzari, j. bravo, m. uriarte, b. barcelona, i. fita, v. rubio
Keywords: arginine catabolism, atp synthesys, acylphosphate-making enzymes, open alpha/beta sheet
- 1qmb.pdb.
serine protease inhibitor 24-sep-99 1qmb
Title: cleaved alpha-1-antitrypsin polymer
Author: j. a. huntington, n. s. pannu, b. hazes, r. j. read, d. a. lomas, r. w. carrell
Keywords: antitrypsin, polymer, cleaved
- 1qnb.pdb.
tata box-binding protein (tbp) 14-oct-99 1qnb
Title: crystal structure of the t(-25) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complex, t(-25) tata box variant
- 1qdr.pdb.
hydrolase 10-jul-99 1qdr
Na
Title: 2.1 a resolution structure of escherichia coli lytic transglycosylase slt35
Author: e. j. van asselt, a. j. dijkstra
Keywords: glycosyl transferase
- 1qpb.pdb.
lyase 26-nov-99 1qpb
Mg
Title: pyruvate decarboyxlase from yeast (form b) complexed with pyruvamide
Author: g. lu, d. dobritzsch, g. schneider
Keywords: pyruvamide, lyase
- 4nos.pdb.
oxidoreductase 03-feb-99 4nos
Zn Fe
Title: human inducible nitric oxide synthase with inhibitor
Author: t. o. fischmann, p. c. weber
Keywords: nitric oxide, human, zns4, oxidoreductase
- 2lis.pdb.
cell adhesion 16-apr-99 2lis
Title: high resolution structure of the red abalone lysin monomer
Author: n. kresge, v. d. vacquier, c. d. stout
Keywords: fertilization protein, gamete recognition protein, cell adhesion
- 2alc.pdb.
dna binding protein 20-jan-99 2alc
Zn
(NMR, 1 structure)
Title: ethanol regulon transcriptional activator dna-binding domain from aspergillus nidulans
Author: r. cerdan, b. cahuzac, b. felenbok, e. guittet
Keywords: dna-binding, transcriptional activator
- 2btc.pdb.
hydrolase/hydrolase inhibitor 11-dec-98 2btc
Ca
Title: bovine trypsin in complex with squash seed inhibitor (cucurbita pepo trypsin inhibitor ii)
Author: r. helland, g. i. berglund, j. otlewski, w. apostoluk, o. a. andersen, n. p. willassen, a. o. smalas
Keywords: trypsin inhibitor
- 3nos.pdb.
oxidoreductase 03-feb-99 3nos
Zn Fe
Title: human endothelial nitric oxide synthase with arginine substrate
Author: t. o. fischmann, p. c. weber
Keywords: nitric oxide, human, zns4, oxidoreductase
- 1nps.pdb.
signaling protein 01-feb-99 1nps
Ca
Title: crystal structure of n-terminal domain of protein s
Author: m. wenk, r. baumgartner, e. m. mayer, r. huber, t. a. holak, r. jaenicke
Keywords: signaling protein
- 1oas.pdb.
lyase 29-jan-99 1oas
Title: o-acetylserine sulfhydrylase from salmonella typhimurium
Author: p. burkhard, g. s. j. rao, e. hohenester, k. d. schnackerz, p. f. cook, j. n. jansonius
Keywords: beta replacement enzyme, plp dependent enzyme, homodimer, lyase
- 1or3.pdb.
lipid binding protein 01-dec-98 1or3
Title: apolipoprotein e3 (apoe3), trigonal truncation mutant 165
Author: b. rupp, b. w. segelke
Keywords: heparin-binding, plasma protein, hdl, vldl
- 1b73.pdb.
isomerase 26-jan-99 1b73
Title: glutamate racemase from aquifex pyrophilus
Author: k. y. hwang, c. cho, s. s. kim, y. g. yu, y. cho
Keywords: isomerase
- 1b7c.pdb.
electron transport 21-jan-99 1b7c
Fe
Title: 0.97 a crystal structure of cytochrome c-553 from bacillus pasteurii
Author: s. benini, s. ciurli, w. r. rypniewski, k. s. wilson
Keywords: heme, cytochrome, bacillus pasteurii, cytochrome c- 553, electron transport
- 1cvs.pdb.
growth factor/growth factor receptor 24-aug-99 1cvs
Title: crystal structure of a dimeric fgf2-fgfr1 complex
Author: a. n. plotnikov, j. schlessinger, s. r. hubbard, m. mohammadi
Keywords: fgfr, immunoglobulin-like, signal transduction, dimerization, growth factor/growth factor receptor
- 1c3c.pdb.
lyase 27-jul-99 1c3c
Title: t. maritima adenylosuccinate lyase
Author: e. a. toth, t. o. yeates
Keywords: lyase
- 1ql3.pdb.
electron transport protein (cytochrome) 19-aug-99 1ql3
Fe
Title: structure of the soluble domain of cytochrome c552 from paracoccus denitrificans in the reduced state
Author: a. harrenga, b. reincke, h. rueterjans, b. ludwig, h. michel
Keywords: reduced
- 1qlc.pdb.
peptide recognition 25-aug-99 1qlc
(NMR, 20 structures)
Title: solution structure of the second pdz domain of postsynaptic density-95
Author: h. tochio, f. hung, m. li, m. zhang
Keywords: neuronal nitric oxide synthase, nmda receptor binding
- 1qn3.pdb.
tata box-binding protein (tbp) 14-oct-99 1qn3
Title: crystal structure of the c(-25) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complex, c(-25) tata box variant
- 1qnc.pdb.
tata box-binding protein (tbp) 14-oct-99 1qnc
Title: crystal structure of the a(-31) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complexes, a (-31) tata box variant
- 1qos.pdb.
lectin 16-nov-99 1qos
Mn Ca
Title: lectin uea-ii complexed with chitobiose
Author: r. loris, h. de greve, m. -h. dao-thi, j. messens, a. imberty, l. wyns
Keywords: carbohydrate binding, n-acetylglucosamine
- 1qjs.pdb.
haem binding protein 01-jun-99 1qjs
Cl Na Fe
Title: mammalian blood serum haemopexin glycosylated-native protein and in complex with its ligand haem
Author: m. paoli, h. m. baker, w. t. morgan, a. smith, e. n. baker
Keywords: haem binding and transport, iron metabolism
- 1qgc.pdb.
virus/viral protein 23-apr-99 1qgc
(electron microscopy, high resolution microscopy, cryo-em reconstruction)
Title: structure of the complex of an fab fragment of a neutralizing antibody with foot and mouth disease virus
Author: i. fita
Keywords: virus/viral protein
- 448d.pdb.
deoxyribonucleic acid 20-jan-99 448d
I
Title: 5'-d(*cp*gp*cp*gp*ap*ap*tp*tp*cp*gp*cp*g)-3', benzimidazole derivative complex
Author: g. r. clark, c. j. squire, r. f. martin, j. white
Keywords: minor groove binding
- 449d.pdb.
deoxyribonucleic acid 20-jan-99 449d
I
Title: 5'-d(*cp*gp*cp*gp*ap*ap*tp*tp*cp*gp*cp*g)-3', benzimidazole derivative complex
Author: c. j. squire, l. j. baker, g. r. clark, r. f. martin, j. white
Keywords: minor groove binding
- 444d.pdb.
deoxyribonucleic acid 14-jan-99 444d
I
Title: 5'-d(*cp*gp*cp*gp*ap*ap*tp*tp*cp*gp*cp*g)-3', benzimidazole derivative complex
Author: g. r. clark, c. j. squire, r. f. martin, j. white
Keywords: minor groove binding
- 445d.pdb.
deoxyribonucleic acid 14-jan-99 445d
I
Title: 5'-d(*cp*gp*cp*gp*ap*ap*tp*tp*cp*gp*cp*g)-3', benzimidazole derivative complex
Author: c. j. squire, l. j. baker, g. r. clark, r. f. martin, j. white
Keywords: minor groove binding
- 442d.pdb.
deoxyribonucleic acid 14-jan-99 442d
Mg I
Title: 5'-d(*cp*gp*cp*gp*ap*ap*tp*tp*cp*gp*cp*g)-3', benzimidazole derivative complex
Author: g. r. clark, c. j. squire, r. f. martin, j. white
Keywords: minor groove binding
- 443d.pdb.
deoxyribonucleic acid 14-jan-99 443d
Mg I
Title: 5'-d(*cp*gp*cp*gp*ap*ap*tp*tp*cp*gp*cp*g)-3'/ benzimidazole derivative complex
Author: c. j. squire, l. j. baker, g. r. clark, r. f. martin, j. white
Keywords: minor groove binding
- 427d.pdb.
deoxyribonucleic acid 21-sep-98 427d
Title: 5'-d(*cp*gp*cp*(ch2-dm1)gp*cp*g)-3'
Author: g. schuerman, l. van meervelt
Keywords: drug complex, formaldehyde cross- link, atomic resolution, double backbone conformation
- 2bid.pdb.
apoptosis 27-jan-99 2bid
(NMR, 15 structures)
Title: human pro-apoptotic protein bid
Author: j. j. chou, h. li, g. s. salvesen, j. yuan, g. wagner
Keywords: apoptosis regulation and amplification
- 1dv4.pdb.
ribosome 19-jan-00 1dv4
W
Title: partial structure of 16s rna of the small ribosomal subunit from thermus thermophilus
Author: a. tocilj, f. schlunzen, d. janell, m. gluhmann, h. hansen, j. harms, a. bashan, h. bartels, i. agmon, f. franceschi, a. yonath
Keywords: 30s, thermus thermophilus, 16s rna
- 1dq4.pdb.
sugar binding protein 30-dec-99 1dq4
Mn
Title: a transient unlocked concanavalin a structure with mn2+ bound in the transition metal ion binding site s1 and an empty calcium binding site s2
Author: j. bouckaert, y. dewallef, f. poortmans, l. wyns, r. loris
Keywords: lectin, metal binding, transient, transition metal, manganese
- 1d8d.pdb.
transferase 22-oct-99 1d8d
Zn
Title: co-crystal structure of rat protein farnesyltransferase complexed with a k-ras4b peptide substrate and fpp analog at 2.0a resolution
Author: s. b. long, p. j. casey, l. s. beese
Keywords: pft, pftase, farnesyltransferase, farnesyl transferase, caax, ras, cancer
- 1b74.pdb.
isomerase 27-jan-99 1b74
Title: glutamate racemase from aquifex pyrophilus
Author: k. y. hwang, c. cho, s. s. kim, y. g. yu, y. cho
Keywords: isomerase
- 1ql4.pdb.
electron transport protein (cytochrome) 19-aug-99 1ql4
Fe
Title: structure of the soluble domain of cytochrome c552 from paracoccus denitrificans in the oxidised state
Author: a. harrenga, b. reincke, h. rueterjans, b. ludwig, h. michel
Keywords: oxidised
- 1qld.pdb.
xylanase 26-aug-99 1qld
(NMR, minimized average structure)
Title: solution structure of type x cbm
Author: s. raghothama, p. j. simpson, h. j. gilbert, m. p. williamson
Keywords: anti parallel beta sheets, xylan degradation, hydrolase, glycosidase
- 1qmd.pdb.
hydrolase 27-sep-99 1qmd
Zn Ca
Title: calcium bound closed form alpha-toxin from clostridium perfringens
Author: c. e. naylor, j. miller, r. w. titball, a. k. basak
Keywords: gangrene determinant, c2 domain, ca and membrane binding.
- 1qmt.pdb.
ribonuclease 06-oct-99 1qmt
Title: recombinant human eosinophil cationic protein
Author: e. boix, d. d. leonidas, k. r. acharya
Keywords: ribonuclease, cytotoxicity
- 1qn4.pdb.
tata box-binding protein (tbp) 14-oct-99 1qn4
Title: crystal structure of the t(-24) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complex, t(-24) tata box variant
- 1qid.pdb.
hydrolase 13-jun-99 1qid
Title: specific chemical and structural damage at nine time points (point a) caused by intense synchrotron radiation to torpedo californica acetylcholinesterase
Author: g. kryger, m. weik, r. b. g. ravelli
Keywords: time series, disulfide bond, serine hydrolase, alpha/beta hydrolase, neurotransmitter cleavage, catalytic triad, glycosylated protein
- 1qjt.pdb.
growth factor 01-jul-99 1qjt
(NMR, 30 structures)
Title: solution structure of the apo eh1 domain of mouse epidermal growth factor receptor substrate 15, eps15
Author: b. whitehead, m. tessari, a. carotenuto, p. m. van bergen en henegouw g. w. vuister
Keywords: eps15, ef-hand, solution structure, s100 protein
- 1qdt.pdb.
hydrolase 10-jul-99 1qdt
Ca
Title: 2.1 a resolution structure of escherichia coli lytic transglycoyslase slt35 in complex with calcium
Author: e. j. van asselt, a. j. dijkstra
Keywords: glycosyl transferase, ef-hand
- 1du5.pdb.
antifungal protein 14-jan-00 1du5
Title: the crystal structure of zeamatin.
Author: m. a. batalia, a. f. monzingo, s. ernst, w. roberts, j. d. robertus
- 1dq5.pdb.
sugar binding protein 30-dec-99 1dq5
Mn
Title: manganese;manganese concanavalin a at ph 5.0
Author: j. bouckaert, y. dewallef, f. poortmans, l. wyns, r. loris
Keywords: lecin, metal binding, manganese, binuclear
- 1d6u.pdb.
oxidoreductase 15-oct-99 1d6u
Cu Ca
Title: crystal structure of e. coli amine oxidase anaerobically reduced with beta-phenylethylamine
Author: c. m. wilmot, j. hajdu, m. j. mcpherson, p. f. knowles, s. e. v. phillips
- 1ecu.pdb.
deoxyribonucleic acid 26-jan-00 1ecu
(NMR)
Title: solution structure of e2f binding dna fragment gcgcgaaac-t- gtttcgcgc
Author: j. h. wu, c. chang, j. m. pei, q. xiao, y. y. shi
Keywords: loop
- 1b75.pdb.
rna binding protein 27-jan-99 1b75
(NMR, 10 structures)
Title: solution structure of ribosomal protein l25 from escherichia coli
Author: m. stoldt, j. woehnert, m. goerlach, l. r. brown
Keywords: rna-binding protein, rna binding protein
- 1cje.pdb.
electron transport 12-apr-99 1cje
Fe
Title: adrenodoxin from bovine
Author: i. a. pikuleva, k. tesh, m. r. waterman, y. kim
Keywords: iron sulfur protein, 2fe-2s ferredoxin
- 1c9u.pdb.
oxidoreductase 03-aug-99 1c9u
Ca
Title: crystal structure of the soluble quinoprotein glucose dehydrogenase in complex with pqq
Author: a. oubrie, h. j. rozeboom, b. w. dijkstra
Keywords: superbarrel, cofactor binding, oxidoreductase
- 1qm5.pdb.
phosphorylase 20-sep-99 1qm5
Title: phosphorylase recognition and phosphorylysis of its oligosaccharide substrate: answers to a long outstanding question
Author: k. a. watson, c. mccleverty, s. geremia, s. cottaz, h. driguez, l. n. johnson
Keywords: phosphorolysis, malp, glycosyltransferase
- 1qn5.pdb.
tata box-binding protein (tbp) 14-oct-99 1qn5
Title: crystal structure of the g(-26) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complex, g(-26) tata box variant
- 1qne.pdb.
tata box-binding protein (tbp) 14-oct-99 1qne
Title: crystal structure of the adenovirus major late promoter tata box bound to wild-type tbp (arabidopsis thaliana tbp isoform 2).
Author: j. l. kim, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complex
- 1qie.pdb.
hydrolase 14-jun-99 1qie
Title: specific chemical and structural damage at nine time points (point b) caused by intense synchrotron radiation to torpedo californica acetylcholinesterase
Author: g. kryger, m. weik, r. b. g. ravelli
Keywords: time series, disulfide bond, serine hydrolase, alpha/beta hydrolase, neurotransmitter cleavage, catalytic triad, glycosylated protein
- 1di6.pdb.
unknown function 29-nov-99 1di6
Title: 1.45 a crystal structure of the molybdenumm cofactor biosynthesis protein moga from escherichia coli
Author: m. t. w. liu, m. m. wuebbens, k. v. rajagopalan, h. schindelin
Keywords: moco, moco biosynthesis, moga, gephyrin
- 1dkv.pdb.
hydrolase 08-dec-99 1dkv
Title: the crystal structure of calcium-free human m-calpain
Author: s. strobl, c. fernandez-catalan, w. bode, k. suzuki
Keywords: calcium, papain-like, hydrolase
- 1dev.pdb.
signaling protein 15-nov-99 1dev
Title: crystal structure of smad2 mh2 domain bound to the smad- binding domain of sara
Author: y. shi, g. wu
Keywords: three-helix bundle
- 1dg6.pdb.
apoptosis 23-nov-99 1dg6
Cl Zn
Title: crystal structure of apo2l/trail
Author: s. g. hymowitz, m. p. o'connell, m. h. ultsch, a. m. de vos, r. f. kelley
Keywords: tnf, trimer, zinc-binding site
- 1db6.pdb.
deoxyribonucleic acid 02-nov-99 1db6
(NMR, 10 structures)
Title: solution structure of the dna aptamer 5'- cgaccaacgtgtcgcctggtcg-3' complexed with argininamide
Author: s. a. robertson, k. harada, a. d. frankel, d. e. wemmer
Keywords: arginine, argininamide, single-strand, hairpin, nmr, selex, deoxyribonucleic acid
- 1dwv.pdb.
complex (oxidoreductase/transferase) 14-dec-99 1dwv
Zn Fe
Title: murine inducible nitric oxide synthase oxygenase dimer n-hydroxyarginine and 4-amino tetrahydrobiopterin
Author: b. r. crane, a. s. arvai, e. d. getzoff, d. j. stuehr, j. a. tainer
Keywords: heme, dimer, intermediate, pterin, 4-amino-tetrahydrobiopterin
- 1dq6.pdb.
sugar binding protein 30-dec-99 1dq6
Mn
Title: manganese;manganese concanavalin a at ph 7.0
Author: j. bouckaert, y. dewallef, f. poortmans, l. wyns, r. loris
Keywords: lectin, metal binding, manganese, binuclear
- 1dsv.pdb.
virus/viral protein 08-jan-00 1dsv
Zn
(NMR, 20 structures)
Title: structure of the mmtv nucleocapsid protein (c-terminal zinc finger)
Author: d. j. klein, p. e. johnson, e. s. zollars, r. n. de guzman, m. f. summers
Keywords: virus/viral protein
- 1d6f.pdb.
transferase 13-oct-99 1d6f
Title: chalcone synthase c164a mutant
Author: j. m. jez, j. l. ferrer, m. e. bowman, r. a. dixon, j. p. noel
Keywords: flavonoid biosynthesis, malonyl-coa decarboxylation, site- directed mutant
- 1d6v.pdb.
immune system 15-oct-99 1d6v
Cd
Title: conformation effects in biological catalysis introduced by oxy-cope antibody maturation
Author: e. c. mundorff, m. a. hanson, p. g. schultz, r. c. stevens
- 1b0v.pdb.
electron transport 12-nov-98 1b0v
Fe
Title: i40n mutant of azotobacter vinelandii fdi
Author: v. sridhar, g. s. prasad, c. d. stout, k. chen, b. k. burgess
- 1c16.pdb.
immune system 20-jul-99 1c16
Title: crystal structure analysis of the gamma/delta t cell ligand t22
Author: c. wingren, m. p. crowley, m. degano, y. -h. chien, i. a. wilson
Keywords: major histocompatibility, beta2- microglobulin
- 1qn6.pdb.
tata box-binding protein (tbp) 14-oct-99 1qn6
Title: crystal structure of the t(-26) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complex, t(-26) tata box variant
- 1qif.pdb.
hydrolase 14-jun-99 1qif
Title: specific chemical and structural damage at nine time points (point c) caused by intense synchrotron radiation to torpedo californica acetylcholinesterase
Author: g. kryger, m. weik, r. b. g. ravelli
Keywords: time series, disulfide bond, serine hydrolase, alpha/beta hydrolase, neurotransmitter cleavage, catalytic triad, glycosylated protein
- 1di7.pdb.
unknown function 29-nov-99 1di7
Title: 1.60 angstrom crystal structure of the molybdenum cofactor biosynthesis protein moga from escherichia coli
Author: m. t. w. liu, m. m. wuebbens, k. v. rajagopalan, h. schindelin
Keywords: moco, moybdenum co-factor, mog, moga, gephyrin
- 1dew.pdb.
lyase/dna 15-nov-99 1dew
Title: crystal structure of human ape1 bound to abasic dna
Author: c. d. mol, t. izumi, s. mitra, j. a. tainer
Keywords: dna repair, abasic site
- 1dtg.pdb.
metal transport 12-jan-00 1dtg
Fe
Title: human transferrin n-lobe mutant h249e
Author: r. t. a. macgillivray, m. c. bewley, c. a. smith, q. -y. he, a. b. mason
Keywords: glycoprotein, metal-binding, repeat, signal, polymorphism, 3d-structure, metal transport
- 1dug.pdb.
transferase, blood clotting 17-jan-00 1dug
Title: structure of the fibrinogen g chain integrin binding and factor xiiia crosslinking sites obtained through carrier protein driven crystallization
Author: s. ware, j. p. donahue, j. hawiger, w. f. anderson
Keywords: carrier protein driven crystallization
- 1dww.pdb.
complex (oxidoreductase/transferase) 14-dec-99 1dww
Zn Fe
Title: murine inducible nitric oxide synthase oxygenase dimer n-hydroxyarginine and dihydrobiopterin
Author: b. r. crane, a. s. arvai, e. d. getzoff, d. j. stuehr, j. a. tainer
Keywords: heme, dimer, intermediate, pterin, h2b, dihydrobiopterin
- 1en7.pdb.
hydrolase 07-feb-99 1en7
Zn Ca
Title: endonuclease vii (endovii) from phage t4
Author: h. c. a. raaijmakers, o. vix, i. toro, d. suck
Keywords: resolvase, holliday junction, dnase
- 1b8g.pdb.
lyase 31-jan-99 1b8g
Title: 1-aminocyclopropane-1-carboxylate synthase
Author: g. capitani, e. hohenester, l. feng, p. storici, j. f. kirsch, j. n. jansonius
- 1b1w.pdb.
transport protein 24-nov-98 1b1w
Title: protein inhibitor of neuronal nitric oxide synthase/neuronal nitric oxide synthase
Author: j. liang, w. guo, s. jaffery, s. snyder, j. clardy
Keywords: lc8, nnos, dynein light chain
- 1ct7.pdb.
hydrolase 19-aug-99 1ct7
(NMR)
Title: solution structure of type x cbd
Author: s. raghothama, p. j. simpson, h. j. gilbert, m. p. williamson
Keywords: antiparallel sheets
- 1cww.pdb.
apoptosis 26-aug-99 1cww
(NMR, 20 structures)
Title: solution structure of the caspase recruitment domain (card) from apaf-1
Author: c. l. day, c. dupont, m. lackmann, d. l. vaux, m. g. hinds
Keywords: apoptosis
- 1qlg.pdb.
phosphomonoesterase 31-aug-99 1qlg
Mg Ca
Title: crystal structure of phytase with magnesium from bacillus amyloliquefaciens
Author: s. shin, n. -c. ha, b. -h. oh
Keywords: thermostable, phosphatase, calcium, magnesium
- 1qn7.pdb.
tata box-binding protein (tbp) 14-oct-99 1qn7
Title: crystal structure of the t(-27) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complexes, t (-27) tata box variant
- 1qig.pdb.
hydrolase 14-jun-99 1qig
Title: specific chemical and structural damage at nine time points (point d) caused by intense synchrotron radiation to torpedo californica acetylcholinesterase
Author: g. kryger, m. weik, r. b. g. ravelli
Keywords: time series, disulfide bond, serine hydrolase, alpha/beta hydrolase, neurotransmitter cleavage, catalytic triad, glycosylated protein
- 1qe7.pdb.
deoxyribonucleic acid 13-jul-99 1qe7
(NMR, 10 structures)
Title: solution structure of a uracil containing hairpin dna
Author: k. v. r. chary, m. ghosh
Keywords: hairpin dna, hairpin loop, double helix
- 1quw.pdb.
electron transport 02-jul-99 1quw
(NMR, 20 structures)
Title: solution structure of the thioredoxin from bacillus acidocaldarius
Author: g. nicastro, c. de chiara, e. pedone, m. tato, m. rossi
Keywords: thiol-disulfide
- 8a3h.pdb.
hydrolase 20-jan-99 8a3h
Title: cellobiose-derived imidazole complex of the endoglucanase cel5a from bacillus agaradhaerens at 0.97 a resolution
Author: a. varrot, m. schulein, m. pipelier, a. vasella, g. j. davies
Keywords: glycoside hydrolase family 5, endoglucanase, transition state analogue, lateral protonation
- 1de8.pdb.
lyase/dna 13-nov-99 1de8
Title: human apurinic/apyrimidinic endonuclease-1 (ape1) bound to abasic dna
Author: c. d. mol, t. izumi, s. mitra, j. a. tainer
Keywords: dna repair, abasic site
- 1dwx.pdb.
complex (oxidoreductase/transferase) 14-dec-99 1dwx
Fe
Title: murine inducible nitric oxide synthase oxygenase dimer n-hydroxyarginine and tetrahydrobiopterin
Author: b. r. crane, a. s. arvai, e. d. getzoff, d. j. stuehr, j. a. tainer
Keywords: heme, dimer, intermediate, pterin, h4b, tetrahydrobiopterin
- 1d6h.pdb.
transferase 13-oct-99 1d6h
Title: chalone synthase (n336a mutant complexed with coa)
Author: j. m. jez, j. l. ferrer, m. e. bowman, r. a. dixon, j. p. noel
Keywords: flavonoid biosynthesis, malonyl-coa decarboxylation, site-directed mutant
- 1gtx.pdb.
transferase 04-feb-99 1gtx
Title: 4-aminobutyrate-aminotransferase from pig
Author: p. storici, g. capitani, t. schirmer
Keywords: aminotransferase, 4-aminobutyric acid, antiepileptic drug target
- 1b78.pdb.
structural genomics 27-jan-99 1b78
Title: structure-based identification of the biochemical function of a hypothetical protein from methanococcus jannaschii:mj0226
Author: k. y. hwang, j. h. chung, y. s. han, s. h. kim, y. cho
Keywords: pyrophosphatase, hyperthermal protein
- 1qn8.pdb.
tata box-binding protein (tbp) 14-oct-99 1qn8
Title: crystal structure of the t(-28) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complexes, t (-28) tata box variant
- 1qih.pdb.
hydrolase 14-jun-99 1qih
Title: specific chemical and structural damage at nine time points (point e) caused by intense synchrotron radiation to torpedo californica acetylcholinesterase
Author: g. kryger, m. weik, r. b. g. ravelli
Keywords: time series, disulfide bond, serine hydrolase, alpha/beta hydrolase, neurotransmitter cleavage, catalytic triad, glycosylated protein
- 1qgx.pdb.
hydrolase 10-may-99 1qgx
Mg
Title: x-ray structure of yeast hal2p
Author: a. albert, l. yenush, m. r. gil-mascarell, p. l. rodriguez, j. patel, m. martinez-ripoll, t. l. blundell, r. serrano
Keywords: salt tollerance, inositol
- 1qsx.pdb.
deoxyribonucleic acid 24-jun-99 1qsx
Na
(NMR)
Title: solution nmr structure of the 2:1 hoechst 33258- d(cttttgcaaaag)2 complex
Author: e. gavathiotis, g. j. sharman, m. s. searle
Keywords: hoechst 33258, deoxyribonucleic acid, minor groove recognition, double helix,nmr spectroscopy
- 1i1y.pdb.
immune system 16-apr-99 1i1y
Title: crystal structure of human class i mhc (hla-a2.1) complexed with beta 2-microglobulin and hiv-rt variant peptide i1y
Author: t. j. kirksey, e. j. collins
Keywords: hiv, immune system
- 1de9.pdb.
lyase/dna 13-nov-99 1de9
Mn
Title: human ape1 endonuclease with bound abasic dna and mn2+ ion
Author: c. d. mol, t. izumi, s. mitra, j. a. tainer
Keywords: dna repair abasic site, ap endonuclease
- 1dgi.pdb.
virus/viral protein, receptor 24-nov-99 1dgi
(electron microscopy)
Title: cryo-em structure of human poliovirus(serotype 1)complexed with three domain cd155,
Author: y. he, v. d. bowman, s. mueller, c. bator, j. bella, x. peng, t. s. baker, e. wimmer, r. j. kuhn, m. g. rossmann
Keywords: pvr, human poliovirus, electron microscopy, poliovirus-receptor complex, virus/viral protein, receptor
- 1dt9.pdb.
translation 12-jan-00 1dt9
Title: the crystal structure of human eukaryotic release factor erf1-mechanism of stop codon recognition and peptidyl-trna hydrolysis
Author: l. frolova
Keywords: trna mimicry, protein sythesis, stop codon recognition, peptidyl-trna hydrolysis
- 1dti.pdb.
oxygen storage/transport 12-jan-00 1dti
Fe
Title: recombinant sperm whale myoglobin h97d, d122n mutant (met)
Author: e. c. liong, g. n. phillips jr.
Keywords: oxygen transport, muscle protein
- 1du9.pdb.
toxin 17-jan-00 1du9
(NMR, 25 structures)
Title: solution structure of bmp02, a natural scorpion toxin which blocks apamin-sensitive calcium-activated potassium channels, 25 structures
Author: y. q. xu, j. h. wu, j. m. pei, y. y. shi, y. h. ji, q. c. tong
Keywords: sheet, toxin
- 1dui.pdb.
hydrolase 17-jan-00 1dui
Na
Title: subtilisin bpn' from bacillus amyloliquefaciens, crystal growth mutant
Author: q. pan, d. t. gallagher
- 1duy.pdb.
immune system 19-jan-00 1duy
Title: crystal structure of hla-a*0201/octameric tax peptide complex
Author: a. r. khan, b. m. baker, p. ghosh, w. e. biddison, d. c. wiley
- 1dv9.pdb.
transport protein 20-jan-00 1dv9
(NMR, 21 structures)
Title: structural changes accompanying ph-induced dissociation of the b-lactoglobulin dimer
Author: s. uhrinova, m. h. smith, g. b. jameson, d. uhrin, l. sawyer, p. n. barlow
Keywords: beta-barrel, low ph structure, triple resonance experiments
- 1dsy.pdb.
transferase 10-jan-00 1dsy
Ca
Title: c2 domain from protein kinase c (alpha) complexed with ca2+ and phosphatidylserine
Author: n. verdaguer, s. corbalan-garcia, w. f. ochoa, i. fita, j. c. gomez- fernandez
Keywords: phospholipid binding protein, calcium-binding protein, phosphatidylserine, protein kinase c
- 1d5i.pdb.
immune system 07-oct-99 1d5i
Cd
Title: unliganded germline precursor of an oxy-cope catalytic antibody
Author: e. c. mundorff, m. a. hanson, p. g. schultz, r. c. stevens
- 1d6i.pdb.
transferase 13-oct-99 1d6i
Title: chalcone synthase (h303q mutant)
Author: j. m. jez, j. l. ferrer, m. e. bowman, r. a. dixon, j. p. noel
Keywords: flavonoid biosynthesis, malonyl-coa decarboxylation, site-directed mutant
- 1d6y.pdb.
oxidoreductase 16-oct-99 1d6y
Cu Ca
Title: crystal structure of e. coli copper-containing amine oxidase anaerobically reduced with beta-phenylethylamine and complexed with nitric oxide.
Author: c. m. wilmot, j. hajdu, m. j. mcpherson, p. f. knowles, s. e. v. phillips
- 1d09.pdb.
transferase 09-sep-99 1d09
Zn
Title: aspartate transcarbamoylase complexed with n-phosphonacetyl- l-aspartate (pala)
Author: l. jin, b. stec, w. n. lipscomb, e. r. kantrowitz
Keywords: transferase
- 1b7y.pdb.
ligase 26-jan-99 1b7y
Mg
Title: phenylalanyl trna synthetase complexed with phenylalaninyl- adenylate
Author: l. reshetnikova, n. moor, o. lavrik, d. g. vassylyev
Keywords: trna synthetase, alpha/beta homodimer
- 1c9i.pdb.
endocytosis/exocytosis 02-aug-99 1c9i
Title: peptide-in-groove interactions link target proteins to the b-propeller of clathrin
Author: e. ter haar, s. c. harrison, t. kirchhausen
Keywords: helical hairpin
- 1qn9.pdb.
tata box-binding protein (tbp) 13-oct-99 1qn9
Title: crystal structure of the c(-29) adenovirus major late promoter tata box variant bound to wild-type tbp (arabidopsis thaliana tbp isoform 2). tata element recognition by the tata box-binding protein has been conserved throughout evolution.
Author: g. a. patikoglou, j. l. kim, l. sun, s. -h. yang, t. kodadek, s. k. burley
Keywords: adenovirus major late promoter (admlp) tata box, tbp-tata element complexes, c (-29) tata box variant
- 1qoy.pdb.
toxin 25-nov-99 1qoy
Title: e.coli hemolysin e (hlye, clya, shea)
Author: a. j. wallace, t. j. stillman, a. atkins, s. j. jamieson, p. a. bullough, j. green, p. j. artymiuk
Keywords: membrane pore former, cytolysin, hemolysin, pores
- 1qii.pdb.
hydrolase 14-jun-99 1qii
Title: specific chemical and structural damage at nine time points (point f) caused by intense synchrotron radiation to torpedo californica acetylcholinesterase
Author: g. kryger, m. weik, r. b. g. ravelli
Keywords: time series, disulfide bond, serine hydrolase, alpha/beta hydrolase, neurotransmitter cleavage, catalytic triad, glycosylated protein
- 1qji.pdb.
hydrolase(metalloproteinase) 24-jun-99 1qji
Zn
Title: structure of astacin with a transition-state analogue inhibitor
Author: f. grams, w. bode, w. stocker
Keywords: astacins, metzincins
- 1qky.pdb.
neurotoxin 17-aug-99 1qky
(NMR, 14 structures)
Title: solution structure of pi7, a non toxic peptide isolated from the scorpion pandinus imperator.
Author: m. delepierre, a. prochnicka-chalufour, j. boisbouvier, l. d. possani
- 1dlz.pdb.
antibiotic 13-dec-99 1dlz
(NMR, 20 structures)
Title: solution structure of the channel-former zervamicin iib (peptaibol antibiotic)
Author: t. a. balashova, z. o. shenkarev, a. a. tagaev, t. v. ovchinnikova, j. raap, a. s. arseniev
Keywords: antibiotic, zervamicin, channel-former, peptaibol, bent helix
- 1duz.pdb.
immune system 19-jan-00 1duz
Title: human class i histocompatibility antigen (hla-a 0201) in complex with a nonameric peptide from htlv-1 tax protein
Author: a. r. khan, b. m. baker, p. ghosh, w. e. biddison, d. c. wiley
- 1d6z.pdb.
oxidoreductase 16-oct-99 1d6z
Cu Ca
Title: crystal structure of the aerobically freeze trapped rate- determining catalytic intermediate of e. coli copper- containing amine oxidase.
Author: c. m. wilmot, j. hajdu, m. j. mcpherson, p. f. knowles, s. e. v. phillips
- 1b8z.pdb.
dna binding protein 03-feb-99 1b8z
Title: hu from thermotoga maritima
Author: e. christodoulou, w. r. rypniewski, c. e. vorgias
Keywords: thermostable dna binding protein
- 1b6z.pdb.
lyase 18-jan-99 1b6z
Zn
Title: 6-pyruvoyl tetrahydropterin synthase
Author: t. ploom, b. thoeny, j. yim, s. lee, h. nar, w. leimbacher, r. huber, j. richardson, g. auerbach
Keywords: pterin, lyase
- 1qmj.pdb.
galectin 29-sep-99 1qmj
Title: cg-16, a homodimeric agglutinin from chicken liver
Author: p. f. varela, d. solis, t. diaz-maurino, h. kaltner, h. -j. gabius, a. romero
- 1qij.pdb.
hydrolase 14-jun-99 1qij
Title: specific chemical and structural damage at nine time points (point g) caused by intense synchrotron radiation to torpedo californica acetylcholinesterase
Author: g. kryger, m. weik, r. b. g. ravelli
Keywords: time series, disulfide bond, serine hydrolase, alpha/beta hydrolase, neurotransmitter cleavage, catalytic triad, glycosylated protein
- 1qjj.pdb.
hydrolase(metalloproteinase) 24-jun-99 1qjj
Zn
Title: structure of astacin with a hydroxamic acid inhibitor
Author: f. grams, w. bode, w. stocker
Keywords: astacins, metzincins
- 1qkz.pdb.
immune system 17-apr-99 1qkz
Title: fab fragment (mn14c11.6) in complex with a peptide antigen derived from neisseria meningitidis p1.7 serosubtype antigen and domain ii from streptococcal protein g
Author: j. p. derrick, i. feavers, m. c. j. maiden
Keywords: pora, neisseria meningitidis, porin
- 1duk.pdb.
oxygen storage/transport 17-jan-00 1duk
Fe
Title: wild-type recombinant sperm whale metaquomyoglobin
Author: d. barrick, f. w. dahlquist
Keywords: myoglobin, heme protein
- 1qnk.pdb.
chemokine 18-oct-99 1qnk
(NMR, 20 structures)
Title: truncated human grob[5-73], nmr, 20 structures
Author: y. q. qian, k. johanson, p. mcdevitt
Keywords: human chemokine grob[5-73], cxc chemokine
- 1qik.pdb.
hydrolase 14-jun-99 1qik
Title: specific chemical and structural damage at nine time points (point h) caused by intense synchrotron radiation to torpedo californica acetylcholinesterase
Author: g. kryger, m. weik, r. b. g. ravelli
Keywords: time series, disulfide bond, serine hydrolase, alpha/beta hydrolase, neurotransmitter cleavage, catalytic triad, glycosylated protein
- 1d7l.pdb.
oxidoreductase 18-oct-99 1d7l
Title: structure-function correlations of the reaction of reduced nicotinamide analogs with p-hydroxybenzoate hydroxylase substituted with a series of 8-substituted flavins
Author: m. ortiz-maldonado, d. gatti, d. p. ballou, v. massey
Keywords: flavin, substituted flavins, oxidoreductase
- 1eel.pdb.
deoxyribonucleic acid 01-feb-00 1eel
Title: structure of a complex between the dna sequence dcgcgaattcgcg and bis[piperidino-ethyl]-furamidine
Author: s. neidle, i. j. simpson
Keywords: b-dna, bulky side-chains
- 1c9l.pdb.
endocytosis/exocytosis 02-aug-99 1c9l
Title: peptide-in-groove interactions link target proteins to the b-propeller of clathrin
Author: e. ter haar, s. c. harrison, t. kirchhausen
Keywords: helical hairpin
- 1dtm.pdb.
oxygen storage/transport 12-jan-00 1dtm
Fe
Title: crystal structure of the sperm-whale myoglobin mutant h93g complexed with 4-methylimidazole, metaquo form
Author: d. barrick, f. w. dahlquist
Keywords: myoglobin, ligand-substitution
- 1drm.pdb.
transferase 06-jan-00 1drm
Fe
Title: crystal structure of the ligand free bjfixl heme domain
Author: w. gong, b. hao, s. s. mansy, g. gonzalez, m. a. gilles-gonzalez, m. k. chan
Keywords: heme domain, crystal structure, pas family, two- component system, histidine kinase
- 1qim.pdb.
hydrolase 14-jun-99 1qim
Title: specific chemical and structural damage at nine time points (point i) caused by intense synchrotron radiation to torpedo californica acetylcholinesterase
Author: g. kryger, m. weik, r. b. g. ravelli
Keywords: time series, disulfide bond, serine hydrolase, alpha/beta hydrolase, neurotransmitter cleavage, catalytic triad, glycosylated protein
- 2lyn.pdb.
cell adhesion 19-apr-99 2lyn
Title: high resolution structure of red abalone lysin dimer
Author: n. kresge, v. d. vacquier, c. d. stout
Keywords: fertilization protein, gamete recognition protein, cell adhesion
- 1qln.pdb.
nucleotidyltransferase 01-sep-99 1qln
Title: structure of a transcribing t7 rna polymerase initiation complex
Author: g. m. t. cheetham, t. a. steitz
Keywords: protein/dna/rna
- 1qmn.pdb.
serpin 01-oct-99 1qmn
Title: alpha1-antichymotrypsin serpin in the delta conformation (partial loop insertion)
Author: b. gooptu, b. hazes, d. a. lomas
Keywords: serine proteinase inhibitor, partial loop insertion, loop-sheet polymerization, emphysema, disease mutation, acute phase protein, conformational disease
- 1dio.pdb.
lyase 27-jan-99 1dio
Co K
Title: diol dehydratase-cyanocobalamin complex from klebsiella oxytoca
Author: n. shibata, j. masuda, t. tobimatsu, t. toraya, k. suto, y. morimoto, n. yasuoka
Keywords: propanediol, potassium ion, tim barrel, lyase
- 1djo.pdb.
hydrolase 03-dec-99 1djo
Title: crystal structure of pseudomonas 7a glutaminase- asparaginase with the inhibitor donv covalently bound in the active site
Author: e. a. ortlund, m. w. lacount, k. lewinski, l. lebioda
Keywords: glutaminase, asparaginase, donv, 5-diazo-4-oxo-l- norvaline, glutaminase-asparaginase, suicide inhibitor, covalently bound inhibitor
- 1duo.pdb.
oxidoreductase 18-jan-00 1duo
Fe
Title: sperm whale metaquomyoglobin proximal histidine mutant h93g with 1-methylimidazole as proximal ligand.
Author: d. barrick, f. w. dahlquist
Keywords: ligand substitution, heme protein
- 1d4o.pdb.
oxidoreductase 04-oct-99 1d4o
Title: crystal structure of transhydrogenase domain iii at 1.2 angstroms resolution
Author: g. s. prasad, v. sridhar, m. yamaguchi, y. hatefi, c. d. stout
Keywords: protein-nadp(h) complex, inverted binding of nadp(h), oxidoreductase
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Metalloprotein Structure and Design project home page:
www.scripps.edu/research/metallo
Computational Center for Macromolecular Structure home page:
www.sdsc.edu/CCMS