Recent PDB releases or updates: week of 1 December 1999

• 1d9p.pdb. membrane protein 29-oct-99 1d9p (NMR, 20 structures)
  Title: solution structure of cecropin a(1-8)-magainin 2(1-12) hybrid peptide analogue(p4)
  Author: d. oh, y. kim
  Keywords: helix-hinge-helix, membrane protein
  
• 1b00.pdb. gene regulation 15-nov-98 1b00
  Title: phob receiver domain from escherichia coli
  Author: m. sola, f. x. gomis-rueth, l. serrano, a. gonzalez, m. coll
  Keywords: transcription factor, phosphate regulation, activation of the pho regulon, alpha/beta doubly wound fold, gene regulation
  
• 1cz0.pdb. gene regulation/dna 31-aug-99 1cz0 Zn Na
  Title: intron encoded homing endonuclease i-ppoi/dna complex lacking catalytic metal ion
  Author: e. a. galburt, b. chevalier, m. s. jurica, k. e. flick, b. l. stoddard
  Keywords: protein-dna complex, distorted dna, his-cys box zinc binding site, beta sheet dna binding, gene regulation/dna
  
• 1c90.pdb. hydrolase 30-jul-99 1c90
  Title: endo-beta-n-acetylglucosaminidase h, e132q mutant
  Author: v. rao, c. tao, c. guan, p. van roey
  Keywords: (beta/alpha)8 barrel, hydrolase
  
• 1vmp.pdb. antiviral protein 25-mar-99 1vmp (NMR, minimized average structure)
  Title: structure of the anti-hiv chemokine vmip-ii
  Author: a. c. liwang, z. -x. wang, y. sun, s. c. peiper, p. j. liwang
  Keywords: vmip-ii, chemokine, monomer, sarcoma, herpesvirus, hhv-8, kaposi's, antiviral protein
  
• 1qmp.pdb. response regulator 04-oct-99 1qmp Ca
  Title: phosphorylated aspartate in the crystal structure of the sporulation response regulator, spo0a
  Author: r. j. lewis, j. a. brannigan, k. muchova, i. barak, a. j. wilkinson
  Keywords: response regulator
  
• 1qip.pdb. lyase 14-jun-99 1qip Zn
  Title: human glyoxalase i complexed with s-p- nitrobenzyloxycarbonylglutathione
  Author: a. d. cameron, m. ridderstrom, b. olin, b. mannervik
  Keywords: lyase, lactoylglutathione lyase, glyoxalase i
  
• 1qbp.pdb. ribonucleic acid 26-apr-99 1qbp Br
  Title: crystal structure of a brominated rna helix with four mismatched base pairs
  Author: a. c. anderson, r. h. o'neil, d. j. filman, c. a. frederick
  Keywords: brominated cytosine, mismatched base pairs, ribonucleic acid
  
• 1qc0.pdb. ribonucleic acid 17-may-99 1qc0
  Title: crystal structure of a 19 base pair copy control related rna duplex
  Author: p. s. klosterman, s. a. shah, t. a. steitz
  Keywords: a-rna structure, ribonucleic acid
  
• 3pva.pdb. hydrolase 13-nov-98 3pva
  Title: penicillin v acylase from b. sphaericus
  Author: c. g. suresh, a. v. pundle, k. n. rao, h. sivaraman, j. a. brannigan, c. e. mcvey, c. s. verma, z. dauter, e. j. dodson, g. g. dodson
  Keywords: amidohydrolase, ntn hydrolase, penicillin v acylase
  
• 1dd1.pdb. signaling protein 05-nov-99 1dd1
  Title: crystal structure analysis of the smad4 active fragment
  Author: b. y. qin, s. w. lam, k. lin
  Keywords: b-sheet sandwich helix-turn-helix, signaling protein
  
• 1dda.pdb. oxidoreductase 09-nov-99 1dda Zn (theoretical model)
  Title: homology model of adh gg with iso-ursodeoxycholic acid
  Author: h. u. marschall, u. c. t. oppermann, s. svensson, e. nordling, b. persson, j. o. hoog, h. jornvall
  Keywords: gamma gamma alcohol dehydrogenase, iso-ursodeoxycholic acid, oxidoreductase
  
• 1de1.pdb. electron transport 12-nov-99 1de1 (NMR)
  Title: nmr structures of oxidized bacteriophage t4 glutaredoxin
  Author: y. wang, d. s. wishart
  Keywords: glutaredoxin, electron transport
  
• 1dg1.pdb. rna binding protein 22-nov-99 1dg1 Mg
  Title: whole, unmodified, ef-tu(elongation factor tu).
  Author: k. abel, m. yoder, r. hilgenfeld, f. jurnak
  Keywords: elongation factor, trna binding, alpha beta shift, ts binding protein, gtpase, gdp binding, rna binding protein
  
• 1ex1.pdb. hydrolase 10-nov-98 1ex1
  Title: beta-d-glucan exohydrolase from barley
  Author: j. n. varghese, m. hrmova, g. b. fincher
  Keywords: hydrolase, cell wall degradation
  
• 1b01.pdb. gene regulation/dna 15-nov-99 1b01
  Title: transcriptional repressor copg/dna complex
  Author: f. x. gomis-rueth, m. sola, p. acebo, a. parraga, a. guasch, r. eritja, a. gonzalez, m. espinosa, g. del solar, m. coll
  Keywords: transcriptional repressor, dna-binding protein, plasmid, protein-dna complex, gene regulation/dna
  
• 1cyq.pdb. gene regulation/dna 31-aug-99 1cyq Mg Zn
  Title: intron encoded homing endonuclease i-ppoi (h98a)/dna homing site complex
  Author: e. a. galburt, b. chevalier, m. s. jurica, k. e. flick, b. l. stoddard
  Keywords: protein-dna complex, distorted dna, his-cys box zinc binding site, beta sheet dna binding, gene regulation/dna
  
• 1ctq.pdb. signaling protein 20-aug-99 1ctq Mg
  Title: structure of p21ras in complex with gppnhp at 100 k
  Author: a. scheidig, c. burmester, r. s. goody
  Keywords: g protein, gtp hydrolysis, kinetic crystallography, signaling protein
  
• 1c91.pdb. hydrolase 30-jul-99 1c91
  Title: endo-beta-n-acetylglucosaminidase h, e132d
  Author: v. rao, t. cui, c. guan, p. van roey
  Keywords: (beta/alpha)8-barrel, hydrolase
  
• 1c9a.pdb. hormone/growth factor 01-aug-99 1c9a (NMR, 20 structures)
  Title: solution structure of neuromedin b
  Author: s. lee, y. kim
  Keywords: neuromedin b, nmr, peptide, hormone/growth factor
  
• 1c0a.pdb. ligase/rna 15-jul-99 1c0a
  Title: crystal structure of the e. coli aspartyl-trna synthetase : trnaasp : aspartyl-adenylate complex
  Author: s. eiler, a. -c. dock-bregeon, l. moulinier, j. -c. thierry, d. moras
  Keywords: protein-rna complex, ligase/rna
  
• 1c21.pdb. hydrolase 22-jul-99 1c21 Co Na
  Title: e. coli methionine aminopeptidase: methionine complex
  Author: w. t. lowther, y. zhang, p. b. sampson, j. f. honek, b. w. matthews
  Keywords: product complex, hydrolase
  
• 1c2q.pdb. dna/rna 26-jul-99 1c2q Ho (NMR)
  Title: solution structure of a dna.rna hybrid containing an alphat- anomeric thymidine and polarity reversals
  Author: m. w. germann, j. m. aramini
  Keywords: dna/rna hybrid, alphat-anomeric thymidine, 3'-3'/5'-5' phosphodiester linkages
  
• 1sn1.pdb. toxin 12-nov-98 1sn1
  Title: structure of scorpion neurotoxin bmk m1
  Author: x. l. he, h. m. li, x. q. liu, z. h. zeng, d. c. wang
  Keywords: neurotoxin, sodium channel inhibitor, scorpion
  
• 2ap2.pdb. immune system 22-mar-99 2ap2
  Title: single chain fv of c219 in complex with synthetic epitope peptide
  Author: j. m. h. van den elsen, d. r. rose
  Keywords: single chain fv, monoclonal antibody, c219, p-glycoprotein, immunoglobulin, immune system
  
• 1nob.pdb. virus/viral protein 05-may-99 1nob
  Title: knob domain from adenovirus serotype 12
  Author: m. c. bewley, k. springer, y. b. zhang, p. freimuth, j. m. flanagan
  Keywords: receptor binding, virus/viral protein
  
• 1de2.pdb. electron transport 12-nov-99 1de2 (NMR)
  Title: nmr structures of reduced bacteriophage t4 glutaredoxin
  Author: y. wang, d. s. wishart
  Keywords: glutaredoxin, electron transport
  
• 1dcr.pdb. deoxyribonucleic acid 05-nov-99 1dcr Mg Br Na
  Title: crystal structure of dna sheared tandem g-a base pairs
  Author: y. -g. gao, h. robinson, r. sanishvili, a. joachimiak, a. h. -j. wang
  Keywords: tandem ga base pairs, ga mismatch, deoxyribonucleic acid
  
• 1d7r.pdb. lyase 19-oct-99 1d7r K Na
  Title: crystal structure of the complex of 2,2-dialkylglycine decarboxylase with 5pa
  Author: v. n. malashkevich, m. d. toney, p. strop, j. keller, j. n. jansonius
  Keywords: enzyme complexes, catalytic mechanism, decarboxylation inhibitor, lyase
  
• 1b1b.pdb. metal binding protein 19-nov-98 1b1b Zn
  Title: iron dependent regulator
  Author: e. pohl, r. k. holmes, w. g. hol
  Keywords: ider, iron depedent regulator, mycobacterium tuberculosis, metal binding protein
  
• 1c92.pdb. hydrolase 30-jul-99 1c92
  Title: endo-beta-n-acetylglucosaminidase h, e132a mutant
  Author: v. rao, t. cui, c. guan, p. van roey
  Keywords: (beta/alpha)8-barrel, hydrolase
  
• 1c22.pdb. hydrolase 22-jul-99 1c22 Co F Na
  Title: e. coli methionine aminopeptidase: trifluoromethionine complex
  Author: w. t. lowther, y. zhang, p. b. sampson, j. f. honek, b. w. matthews
  Keywords: product complex, hydrolase
  
• 1c3b.pdb. hydrolase 27-jul-99 1c3b B
  Title: ampc beta-lactamase from e. coli complexed with inhibitor, benzo(b)thiophene-2-boronic acid (bzb)
  Author: r. a. powers, j. blazquez, g. s. weston, m. i. morosini, f. baquero, b. k. shoichet
  Keywords: cephalosporinase, beta-lactamase, serine hydrolase
  
• 1qib.pdb. hydrolase 11-jun-99 1qib Zn Ca
  Title: crystal structure of gelatinase a catalytic domain
  Author: v. dhanaraj, m. g. williams, q. -z. ye, f. molina, l. l. johnson, d. f. ortwine, a. pavlovsky, j. r. rubin, r. w. skeean, a. d. white, c. humblet, d. j. hupe, t. l. blundell
  Keywords: inhibitor, matrixin, matrix metalloproteinase-2 (mmp-2), gelatinase a, metzincin, hydrolase
  
• 19hc.pdb. electron transport 27-nov-98 19hc Fe
  Title: nine-haem cytochrome c from desulfovibrio desulfuricans atcc 27774
  Author: p. m. matias, r. coelho, i. a. c. pereira, a. v. coelho, a. w. thompson, l. sieker, j. l. gall, m. a. carrondo
  Keywords: electron transfer, cytochrome, electron transport
  
• 1kac.pdb. virus/viral protein/receptor 05-may-99 1kac
  Title: knob domain from adenovirus serotype 12 in complex with domain 1 of its cellular receptor car
  Author: m. c. bewley, k. springer, y. b. zhang, p. freimuth, j. m. flanagan
  Keywords: adhesion protein receptor complex, viral protein/receptor complex, virus/viral protein/receptor
  
• 1db3.pdb. lyase 02-nov-99 1db3
  Title: e.coli gdp-mannose 4,6-dehydratase
  Author: j. r. somoza, s. menon, w. s. somers, f. x. sullivan
  Keywords: dehydratase, nadp, gdp-mannose, gdp-fucose, lyase
  
• 1d4c.pdb. oxidoreductase 03-oct-99 1d4c Fe
  Title: crystal structure of the uncomplexed form of the flavocytochrome c fumarate reductase of shewanella putrefaciens strain mr-1
  Author: d. leys, a. s. tsapin, t. e. meyer, m. a. cusanovich, j. j. van beeumen
  Keywords: tetraheme flavocytochrome c, oxidoreductase
  
• 1d7s.pdb. lyase 19-oct-99 1d7s K Na
  Title: crystal structure of the complex of 2,2-dialkylglycine decarboxylase with dcs
  Author: v. n. malashkevich, m. d. toney, p. strop, j. keller, j. n. jansonius
  Keywords: enzyme complexes, catalytic mechanism, decarboxylation inhibitor, lyase
  
• 1b1c.pdb. oxidoreductase 19-nov-98 1b1c Ca
  Title: crystal structure of the fmn-binding domain of human cytochrome p450 reductase at 1.93a resolution
  Author: q. zhao, s. modi, g. smith, m. paine, p. d. mcdonagh, c. r. wolf, d. tew, l. -y. lian, g. c. k. roberts, h. p. c. driessen
  Keywords: flavoprotein, cytochrome p450 reductase, p450 reductase, fmn-binding domain, fmn, oxidoreductase
  
• 1cx3.pdb. deoxyribonucleic acid 27-aug-99 1cx3 (NMR, 15 structures)
  Title: solution structure of a complex between d(atgcat)2 and the antitumor bisnaphthalimide lu-79553
  Author: j. gallego, b. r. reid
  Keywords: topoisomerase, anticancer, dna, naphthalimide, intercalation, deoxyribonucleic acid
  
• 1czs.pdb. blood clotting 07-sep-99 1czs Hg
  Title: crystal structure of the c2 domain of human coagulation factor v: complex with phenylmercury
  Author: s. macedo-ribeiro, w. bode, r. huber, w. h. kane, p. fuentes-prior
  Keywords: coagulation, membrane-binding, discoidin family, calcium- independent, blood clotting
  
• 1cq3.pdb. cytokine 05-aug-99 1cq3
  Title: structure of a soluble secreted chemokine inhibitor, vcci, from cowpox virus
  Author: a. carfi, c. a. smith, p. j. smolak, j. mcgrew, d. c. wiley
  Keywords: beta sandwich, chemokine, cytokine
  
• 1c93.pdb. hydrolase 30-jul-99 1c93
  Title: endo-beta-n-acetylglucosaminidase h, d130n/e132q double mutant
  Author: v. rao, t. cui, c. guan, p. van roey
  Keywords: (beta/alpha)8 barrel, hydrolase
  
• 1c23.pdb. hydrolase 22-jul-99 1c23 Co Na
  Title: e. coli methionine aminopeptidase: methionine phosphonate complex
  Author: w. t. lowther, y. zhang, p. b. sampson, j. f. honek, b. w. matthews
  Keywords: product complex, hydrolase
  
• 1qi3.pdb. hydrolase 01-jun-99 1qi3 Ca
  Title: mutant (d193n) maltotetraose-forming exo-amylase in complex with maltotetraose
  Author: k. hasegawa, m. kubota, y. matsuura
  Keywords: hydrolase, maltotetraose-forming exo amylase
  
• 2tod.pdb. lyase 18-may-99 2tod
  Title: ornithine decarboxylase from trypanosoma brucei k69a mutant in complex with alpha-difluoromethylornithine
  Author: n. v. grishin, a. l. osterman, h. b. brooks, m. a. phillips, e. j. goldsmith
  Keywords: polyamine metabolism, pyridoxal 5'-phosphate, alpha-beta barrel, lyase
  
• 1df4.pdb. virus/viral protein 17-nov-99 1df4
  Title: interactions between hiv-1 gp41 core and detergents and their implications for membrane fusion
  Author: w. shu, h. ji, m. lu
  Keywords: hiv-1, gp41, membrane fusion, protein-detergent interaction, virus/viral protein
  
• 1db4.pdb. hydrolase/hydrolase inhibitor 02-nov-99 1db4 Ca
  Title: human s-pla2 in complex with indole 8
  Author: n. y. chirgadze, r. w. schevitz, j. -p. wery
  Keywords: s-pla2, structure-based drug design, hydrolase/hydrolase inhibitor
  
• 1d4d.pdb. oxidoreductase 03-oct-99 1d4d Fe
  Title: crystal structure of the succinate complexed form of the flavocytochrome c fumarate reductase of shewanella putrefaciens strain mr-1
  Author: d. leys, a. s. tsapin, t. e. meyer, m. a. cusanovich, j. j. van beeumen
  Keywords: tetraheme flavocytochrome c fumarate reductase, oxidoreductase
  
• 1b04.pdb. ligase 16-nov-98 1b04
  Title: structure of the adenylation domain of an nad+ dependent ligase
  Author: m. r. singleton, k. hakansson, d. j. timson, d. b. wigley
  Keywords: ligase, dna replication
  
• 1b14.pdb. oxidoreductase 25-nov-98 1b14
  Title: alcohol dehydrogenase from drosophila lebanonensis binary complex with nad+
  Author: j. benach, s. atrian, r. gonzalez-duarte, r. ladenstein
  Keywords: detoxification, metabolism, alcohol dehydrogenase, drosophila lebanonensis, short-chain dehydrogenases/reductases, binary complex, oxidoreductase
  
• 1czt.pdb. blood clotting 07-sep-99 1czt
  Title: crystal structure of the c2 domain of human coagulation factor v
  Author: s. macedo-ribeiro, w. bode, r. huber, w. h. kane, p. fuentes-prior
  Keywords: coagulation, membrane-binding, discoidin family, calcium- independent, blood clotting
  
• 1cqt.pdb. gene regulation/dna 11-aug-99 1cqt
  Title: crystal structure of a ternary complex containing an oca-b peptide, the oct-1 pou domain, and an octamer element
  Author: d. i. chasman, k. cepek, p. a. sharp, c. o. pabo
  Keywords: pou domain, protein-dna complex, oct1, oca-b, protein-dna interface, gene regulation/dna
  
• 1c24.pdb. hydrolase 22-jul-99 1c24 Co Na
  Title: e. coli methionine aminopeptidase: methionine phosphinate complex
  Author: w. t. lowther, y. zhang, p. b. sampson, j. f. honek, b. w. matthews
  Keywords: product complex, hydrolase
  
• 1qot.pdb. lectin 16-nov-99 1qot Mn Ca
  Title: lectin uea-ii complexed with fucosyllactose and fucosylgalactose
  Author: r. loris, h. de greve, m. -h. dao-thi, j. messens, a. imberty, l. wyns
  Keywords: lectin, carbohydrate binding, fucosyllctose, fucosylgalactose
  
• 1qh4.pdb. transferase 11-may-99 1qh4 Ca
  Title: crystal structure of chicken brain-type creatine kinase at 1.41 angstrom resolution
  Author: m. eder, u. schlattner, a. becker, t. wallimann, w. kabsch, k. fritz- wolf
  Keywords: brain-type creatine kinase, cancer, cellular energy metabolism, guanidino kinase, neurodegenerative disorders
  
• 1qi4.pdb. hydrolase 01-jun-99 1qi4 Ca
  Title: mutant (e219g) maltotetraose-forming exo-amylase in complex with maltotetraose
  Author: k. hasegawa, m. kubota, y. matsuura
  Keywords: hydrolase, maltotetraose-forming exo amylase
  
• 1qjd.pdb. fumarate reductase 23-jun-99 1qjd Na Fe
  Title: flavocytochrome c3 from shewanella frigidimarina
  Author: p. taylor, s. l. pealing, g. a. reid, s. k. chapman, m. d. walkinshaw
  Keywords: fumarate reductase, respiratory fumarate reductase
  
• 1qu4.pdb. lyase 06-jul-99 1qu4
  Title: crystal structure of trypanosoma brucei ornithine decarboxylase
  Author: n. v. grishin, a. l. osterman, h. b. brooks, m. a. phillips, e. j. goldsmith
  Keywords: polyamine metabolism, pyridoxal 5'-phosphate, alpha-beta barrel, lyase
  
• 1qs4.pdb. hydrolase 25-jun-99 1qs4 Cl Mg
  Title: core domain of hiv-1 integrase comlexed with mg++ and 1-(5- chloroindol-3-yl)-3-hydroxy-3-(2h-tetrazol-5-yl)-propenone
  Author: y. goldgur, r. craigie, t. fujiwara, t yoshinaga, d. r. davies
  Keywords: dna integration, integrase, hiv, hydrolase, aspartyl protease, endonuclease
  
• 1sn4.pdb. toxin 11-nov-98 1sn4
  Title: structure of scorpion neurotoxin bmk m4
  Author: x. l. he, h. m. li, x. q. liu, z. h. zeng, d. c. wang
  Keywords: neurotoxin, sodium channel inhibitor, scorpion
  
• 1df5.pdb. virus/viral protein 17-nov-99 1df5
  Title: interactions between hiv-1 gp41 core and detergents and their implications for membrane fusion
  Author: w. shu, h. ji, m. lu
  Keywords: hiv-1, gp41, membrane fusion, protein-detergent interaction, virus/viral protein
  
• 1dfe.pdb. ribosome 19-nov-99 1dfe Zn (NMR, minimized average structure)
  Title: nmr structure of ribosomal protein l36 from thermus thermophilus
  Author: t. hard, a. rak, p. allard, l. kloo, m. garber
  Keywords: anti-parallel beta sheet, zinc binding, ribosome
  
• 1db5.pdb. hydrolase/hydrolase inhibitor 02-nov-99 1db5 Ca
  Title: human s-pla2 in complex with indole 6
  Author: n. y. chirgadze, r. w. schevitz, j. -p. wery
  Keywords: s-pla2; structure-based drug design, hydrolase/hydrolase inhibitor
  
• 1d4e.pdb. oxidoreductase 03-oct-99 1d4e Fe
  Title: crystal structure of the flavocytochrome c fumarate reductase of shewanella putrefaciens strain mr-1 complexed with fumarate
  Author: d. leys, a. s. tsapin, t. e. meyer, m. a. cusanovich, j. j. van beeumen
  Keywords: tetraheme flavocytochrome c fumarate reductase, oxidoreductase
  
• 1d7u.pdb. lyase 19-oct-99 1d7u K Na
  Title: crystal structure of the complex of 2,2-dialkylglycine decarboxylase with lcs
  Author: v. n. malashkevich, m. d. toney, p. strop, j. keller, j. n. jansonius
  Keywords: enzyme complexes, catalytic mechanism, decarboxylation inhibitor, lyase
  
• 1d3u.pdb. gene regulation/dna 01-oct-99 1d3u
  Title: tata-binding protein/transcription factor (ii)b/bre+tata- box complex from pyrococcus woesei
  Author: o. littlefield, y. korkhin, p. b. sigler
  Keywords: protein-dna complex, transcription, hyperthermophile, gene regulation/dna
  
• 1b9e.pdb. hormone/growth factor 12-nov-98 1b9e
  Title: human insulin mutant serb9glu
  Author: d. c. wang, z. h. zeng, z. p. yao, h. m. li
  Keywords: hormone, fast-acting insulin, hormone/growth factor
  
• 1b0u.pdb. transport protein 12-nov-98 1b0u Cl
  Title: atp-binding subunit of the histidine permease from salmonella typhimurium
  Author: l. -w. hung, i. x. wang, k. nikaido, p. -q. liu, g. f. -l. ames, s. -h. kim
  Keywords: abc transporter, histidine permease, transport protein
  
• 1b15.pdb. oxidoreductase 25-nov-98 1b15
  Title: alcohol dehydrogenase from drosophila lebanonensis ternary complex with nad-acetone
  Author: j. benach, s. atrian, r. gonzalez-duarte, r. ladenstein
  Keywords: oxidoreductase, detoxification, metabolism, alcohol dehydrogenase, drosophila lebanonensis, short-chain dehydrogenases/reductases, ternary complex, nad-acetone adduct
  
• 1qi5.pdb. hydrolase 03-jun-99 1qi5 Ca
  Title: mutant (d294n) maltotetraose-forming exo-amylase in complex with maltotetraose
  Author: k. hasegawa, m. kubota, y. matsuura
  Keywords: hydrolase, maltotetraose-forming exo amylase
  
• 1qcu.pdb. ribonucleic acid 14-may-99 1qcu
  Title: crystal structure of an 18 base pair copy control related rna duplex
  Author: p. s. klosterman, s. a. shah, t. a. steitz
  Keywords: a-rna structure, ribonucleic acid
  
• 1d8v.pdb. antitumor protein 26-oct-99 1d8v (NMR, minimized average structure)
  Title: the restrained and minimized average nmr structure of map30.
  Author: y. -x. wang, n. neamati, j. jacob, i. palmer, s. j. stahl
  Keywords: single chain, antitumor protein
  
• 1d9v.pdb. metal binding protein 30-oct-99 1d9v
  Title: haemophilus influenzae ferric-binding protein apo form
  Author: d. e. mcree, c. m. bruns, p. a. williams
  Keywords: ferric, binding protein, iron, apo form, periplasmic protein, abc cassette receptor protein, metal binding protein
  
• 1d5f.pdb. ligase 07-oct-99 1d5f
  Title: structure of an e6ap-ubch7 complex: insights into the ubiquitination pathway
  Author: l. huang, e. kinnucan, g. wang, s. beaudenon, p. m. howley, j. m. huibregtse, n. p. pavletich
  Keywords: bilobal structure, elongated shape, e3 ligase
  
• 1d7v.pdb. lyase 19-oct-99 1d7v K Na
  Title: crystal structure of the complex of 2,2-dialkylglycine decarboxylase with nma
  Author: v. n. malashkevich, m. d. toney, p. strop, j. keller, j. n. jansonius
  Keywords: enzyme complexes, catalytic mechanism, decarboxylation inhibitor, lyase
  
• 1d3v.pdb. hydrolase 01-oct-99 1d3v B Mn
  Title: crystal structure of the binuclear manganese metalloenzyme arginase complexed with 2(s)-amino-6-boronohexanoic acid, an l-arginine analog
  Author: j. d. cox, n. n. kim, a. m. traish, d. w. christianson
  Keywords: binuclear manganese cluster, boronic acid inhibitor, perfectly twinned crystal, hydrolase
  
• 1b06.pdb. oxidoreductase 16-nov-98 1b06 Fe
  Title: superoxide dismutase from sulfolobus acidocaldarius
  Author: s. knapp, s. kardinahl, h. niklas, g. tibbelin, g. schafer, r. ladenstein
  Keywords: superoxide dismutase, oxidoreductase
  
• 1b16.pdb. oxidoreductase 25-nov-98 1b16
  Title: alcohol dehydrogenase from drosophila lebanonensis ternary complex with nad-3-pentanone
  Author: j. benach, s. atrian, r. gonzalez-duarte, r. ladenstein
  Keywords: oxidoreductase, detoxification, metabolism, alcohol dehydrogenase, drosophila lebanonensis, short-chain dehydrogenases/reductases, ternary complex, nad-3-pentanone adduct
  
• 1czv.pdb. blood clotting 07-sep-99 1czv
  Title: crystal structure of the c2 domain of human coagulation factor v: dimeric crystal form
  Author: s. macedo-ribeiro, w. bode, r. huber, w. h. kane, p. fuentes-prior
  Keywords: coagulation, membrane-binding, discoidin family, calcium- independent, blood clotting
  
• 1cr6.pdb. hydrolase 13-aug-99 1cr6
  Title: crystal structure of murine soluble epoxide hydrolase complexed with cpu inhibitor
  Author: m. a. argiriadi, c. morisseau, b. d. hammock, d. w. christianson
  Keywords: homodimer, alpha/beta hydrolase fold, disubstituted urea inhibitor
  
• 1c3f.pdb. hydrolase 27-jul-99 1c3f
  Title: endo-beta-n-acetylglucosaminidase h, d130n mutant
  Author: v. rao, t. cui, c. guan, p. van roey
  Keywords: (beta-alpha)8-barrel, hydrolase
  
• 2cpg.pdb. gene regulation 15-nov-99 2cpg Cl
  Title: transcriptional repressor copg
  Author: f. x. gomis-rueth, m. sola, p. acebo, a. parraga, a. guasch, r. eritja, a. gonzalez, m. espinosa, g. del solar, m. coll
  Keywords: transcriptional repressor, dna-binding protein, plasmid, gene regulation
  
• 1dbw.pdb. gene regulation 03-nov-99 1dbw
  Title: crystal structure of fixj-n
  Author: p. gouet, b. fabry, v. guillet, c. birck, l. mourey, d. kahn, j. p. samama
  Keywords: doubly wound five-stranded beta/alpha fold, nitrogen fixation regulation, gene regulation
  
• 1d9w.pdb. hydrolase 30-oct-99 1d9w
  Title: bacteriophage t4 lysozyme mutant
  Author: i. p. korndoerfer, b. w. matthews
  Keywords: hydrolase (o-glycosyl), t4 lysozyme, helix capping, helix dipole
  
• 1d6g.pdb. hormone/growth factor 13-oct-99 1d6g (NMR)
  Title: molecular complex of cholecystokinin-8 and n-terminus of the cholecystokinin a receptor by nmr spectroscopy
  Author: m. pellegrini, d. f. mierke
  Keywords: alpha-helix, beta-sheet, complex gpcr-ligand, hormone/growth factor
  
• 1cxw.pdb. hydrolase 31-aug-99 1cxw (NMR, 50 structures)
  Title: the second type ii module from human matrix metalloproteinase 2
  Author: k. briknarova, a. grishaev, l. banyai, h. tordai, l. patthy, m. llinas
  Keywords: beta sheet, alpha helix, hydrolase
  
• 1c17.pdb. membrane protein 20-jul-99 1c17 (NMR)
  Title: a1c12 subcomplex of f1fo atp synthase
  Author: v. k. rastogi, m. e. girvin
  Keywords: membrane protein, helix, complex
  
• 1c27.pdb. hydrolase 22-jul-99 1c27 Co Na
  Title: e. coli methionine aminopeptidase:norleucine phosphonate complex
  Author: w. t. lowther, y. zhang, p. b. sampson, j. f. honek, b. w. matthews
  Keywords: product complex, hydrolase
  
• 1qnw.pdb. lectin 22-oct-99 1qnw Mn Ca
  Title: lectin ii from ulex europaeus
  Author: r. loris, h. de greve, m. -h. dao-thi, j. messens, a. imberty, l. wyns
  Keywords: lectin, carbohydrate binding
  
• 1qjg.pdb. ketosteroid isomerase 23-jun-99 1qjg
  Title: crystal structure of delta5-3-ketosteroid isomerase from pseudomonas testosteroni in complex with equilenin
  Author: h. -s. cho, b. -h. oh
  Keywords: ksi, isomerase, steroid isomeration
  
• 1dd8.pdb. transferase 09-nov-99 1dd8
  Title: crystal structure of beta-ketoacyl-[acyl carrier protein] synthase i from escherichia coli
  Author: j. g. olsen, a. kadziola, p. v. wettstein-knowles, m. siggaard- andersen, y. lindquist, s. larsen
  Keywords: thiolase fold, transferase
  
• 1b08.pdb. sugar binding protein 18-nov-98 1b08 Ca
  Title: lung surfactant protein d (sp-d) (fragment)
  Author: k. hakansson, n. k. lim, h. -j. hoppe, k. b. m. reid
  Keywords: c-type lectin, crd, sp-d, colectin, alpha-helical coiled- coil, lung surfactant, sugar binding protein
  
• 1cn8.pdb. ribosome/rna 26-may-99 1cn8 (NMR, minimized average structure)
  Title: ribosomal protein l30-mrna complex from yeast
  Author: h. mao, s. a. white, j. r. willamson
  Keywords: ribosomal protein, pre-mrna, mrna, autoregulation, protein- rna complex, ribosome/rna
  
• 1c8x.pdb. hydrolase 30-jul-99 1c8x
  Title: endo-beta-n-acetylglucosaminidase h, d130e mutant
  Author: v. rao, c. tao, c. guan, p. van roey
  Keywords: (alpha/beta)8-barrel, hydrolase
  
• 1c58.pdb. carbohydrate 04-nov-99 1c58
  Title: crystal structure of cycloamylose 26
  Author: k. gessler, w. saenger, o. nimz
  Keywords: cycloamylose
  
• 1qr8.pdb. virus/viral protein 18-jun-99 1qr8
  Title: inhibition of hiv-1 infectivity by the gp41 core: role of a conserved hydrophobic cavity in membrane fusion
  Author: h. ji, w. shu, f. t. burling, s. b. jiang, m. lu
  Keywords: gp41, hiv-1, membrane fusion, hiv-1 inhibition, virus/viral protein
  
• 1dbi.pdb. hydrolase 02-nov-99 1dbi Na Ca
  Title: crystal structure of a thermostable serine protease
  Author: c. a. smith, h. s. toogood, h. m. baker, r. m. daniel, e. n. baker
  Keywords: hydrolase
  
• 1dcy.pdb. hydrolase/hydrolase inhibitor 05-nov-99 1dcy Ca
  Title: crystal structure of human s-pla2 in complex with indole 3 active site inhibitor
  Author: n. y. chirgadze, r. w. schevitz, j. -p. wery
  Keywords: s-pla2; structure-based drug design, hydrolase/hydrolase inhibitor
  
• 1d9y.pdb. metal binding protein 30-oct-99 1d9y Fe
  Title: neisseria gonorrhoeae ferric binding protein
  Author: d. e. mcree, c. m. bruns, p. a. williams, t. a. mietzner, r. nunn
  Keywords: ferric binding protein, periplasmic binding protein, fbpa, ghonnorhea, neisseria, metal binding protein
  
• 1b09.pdb. immune system 18-nov-98 1b09 Ca
  Title: human c-reactive protein complexed with phosphocholine
  Author: d. thompson, m. b. pepys, s. p. wood
  Keywords: pentraxin, acute-phase reactant, phosphocholine, immune system
  
• 1b2i.pdb. hydrolase 24-sep-99 1b2i (NMR)
  Title: kringle 2 domain of human plasminogen: nmr solution structure of trans-4-aminomethylcyclohexane-1-carboxylic acid (amcha) complex
  Author: d. n. marti, j. schaller, m. llinas
  Keywords: serine protease, fibrinolysis, lysine-binding domain, plasminogen, kringle 2, hydrolase
  
• 1cn9.pdb. ribosome/rna 26-may-99 1cn9 (NMR, 21 structures)
  Title: rpl30-mrna complex
  Author: h. mao, s. a. white, j. r. willamson
  Keywords: ribosomal protein, pre-mrna, mrna, autoregulation, protein- rna complex, nmr, ribosome/rna
  
• 1c8y.pdb. hydrolase 30-jul-99 1c8y Zn
  Title: endo-beta-n-acetylglucosaminidase h, d130a mutant
  Author: v. rao, t. cui, c. guan, p. van roey
  Keywords: (beta/alpha)8-barrel, hydrolase
  
• 1c99.pdb. proton transport, hydrolase 30-apr-99 1c99 (NMR)
  Title: asp61 deprotonated form of subunit c of the f1fo atp synthase of escherichia coli
  Author: v. k. rastogi, m. e. girvin
  Keywords: proteolipid f1fo, atp synthase, proton translocation, proton transport, hydrolase
  
• 1qd9.pdb. gene regulation 09-jul-99 1qd9 Hg
  Title: bacillus subtilis yabj
  Author: j. l. smith, s. sinha, p. rappu, s. c. lange, p. mantsala, h. zalkin
  Keywords: perchloric acid soluble protein, purine regulation, yjgf/yer057c family, gene regulation
  
• 1qu9.pdb. structural genomics 07-jul-99 1qu9
  Title: 1.2 a crystal structure of yjgf gene product from e. coli
  Author: k. volz
  Keywords: structural genomics
  
• 1qr9.pdb. virus/viral protein 18-jun-99 1qr9
  Title: inhibition of hiv-1 infectivity by the gp41 core: role of a conserved hydrophobic cavity in membrane fusion
  Author: h. ji, w. shu, f. t. burling, s. b. jiang, m. lu
  Keywords: gp41, hiv-1 envelope protein, membrane fusion, hiv-1 inhibition, virus/viral protein
  
• 1d9j.pdb. membrane protein 28-oct-99 1d9j (NMR, 20 structures)
  Title: solution structure of cecropin a(1-8)-magainin 2(1-12) hybrid peptide
  Author: d. oh, y. kim
  Keywords: helix-hinge-helix, membrane protein
  
• 1d2z.pdb. apoptosis 28-sep-99 1d2z
  Title: three-dimensional structure of a complex between the death domains of pelle and tube
  Author: t. xiao, p. towb, s. a. wasserman, s. r. sprang
  Keywords: six-helix bundle, linear array of death domains, plastic interfaces, apoptosis
  
• 1b0z.pdb. isomerase 15-nov-98 1b0z
  Title: the crystal structure of phosphoglucose isomerase-an enzyme with autocrine motility factor activity in tumor cells
  Author: y. -j. sun, c. -c. chou, w. -s. chen, m. meng, c. -d. hsiao
  Keywords: phosphoglucose isomerase, autocrinefactor, neuroleukin, crystallography motility
  
• 1b1z.pdb. toxin 24-nov-98 1b1z
  Title: streptococcal pyrogenic exotoxin a1
  Author: a. c. papageorgiou, k. r. acharya
  Keywords: superantigen, zinc binding, pyrogenic exotoxin
  
• 1cqz.pdb. hydrolase 12-aug-99 1cqz
  Title: crystal structure of murine soluble epoxide hydrolase.
  Author: m. a. argiriadi, c. morisseau, b. d. hammock, d. w. christianson
  Keywords: homodimer, alpha/beta hydrolase fold, domain-swapping
  
• 1c4z.pdb. ligase 14-oct-99 1c4z
  Title: structure of e6ap: insights into ubiquitination pathway
  Author: l. huang, e. kinnucan, g. wang, s. beaudenon, p. m. howley, j. m. huibregtse, n. p. pavletich
  Keywords: bilobal structure, elongated shape, e3 ubiquitin ligase, e2 ubiquitin conjugating enzyme
  
• 1c1z.pdb. signaling protein 22-jul-99 1c1z
  Title: crystal structure of human beta-2-glycoprotein-i (apolipoprotein-h)
  Author: r. schwarzenbacher, k. zeth, k. diederichs, a. gries, g. m. kostner, p. laggner, r. prassl
  Keywords: glycoprotein, short consensus repeat, scr, sushi domain, complement control protein module, ccp, signaling protein
  
• 1hmk.pdb. transferase 26-nov-98 1hmk Ca
  Title: recombinant alpha-lactalbumin
  Author: t. k. chaudhuri, k. horii, t. yoda, m. arai, s. nagata, t. p. terada, h. uchiyama, t. ikura, k. tsumoto, h. kataoka, m. matsushima, k. kuwajima, i. kumagai
  Keywords: lactose synthase component, calcium binding metalloprotein, lactose, glycoprotein, transferase
  
• 1dck.pdb. gene regulation 05-nov-99 1dck Mn
  Title: structure of unphosphorylated fixj-n complexed with mn2+
  Author: p. gouet, b. fabry, v. guillet, c. birck, l. mourey, d. kahn, j. p. samama
  Keywords: doubly wound five-stranded beta/alpha fold, nitrogen fixation regulation, gene regulation
  
• 1d6k.pdb. ribosome 14-oct-99 1d6k (NMR, 20 structures)
  Title: nmr solution structure of the 5s rrna e-loop/l25 complex
  Author: m. stoldt, j. wohnert, o. ohlenschlager, m. gorlach, l. r. brown
  Keywords: protein-rna complex, ribosome
  
• 1qpk.pdb. hydrolase 26-may-99 1qpk Ca
  Title: mutant (d193g) maltotetraose-forming exo-amylase in complex with maltotetraose
  Author: y. yoshioka, k. hasegawa, y. matsuura, y. katsube, m. kubota
  Keywords: beta-alpha-barrels, hydrolase
  
• 1d9l.pdb. membrane protein 28-oct-99 1d9l (NMR, 20 structures)
  Title: solution structure of cecropin a(1-8)-magainin 2 hybrid peptide analogue(p1)
  Author: d. oh, y. kim
  Keywords: helix-helix, membrane protein
  
• 1d3l.pdb. cell adhesion 29-sep-99 1d3l
  Title: d1d2-icam-1 fully glycosylated, variation of d1-d2 interdomain angle in different crystal structures.
  Author: j. bella, p. r. kolatkar, m. g. rossmann
  Keywords: rhinovirus receptor, adhesion protein, glycoprotein, immunoglobulin fold, cell adhesion
  
• 1b2l.pdb. oxidoreductase 26-nov-98 1b2l Ca
  Title: alcohol dehydrogenase from drosophila lebanonensis: ternary complex with nad-cyclohexanone
  Author: j. benach, s. atrian, r. gonzalez-duarte, r. ladenstein
  Keywords: oxidoreductase, detoxification, metabolism, alcohol dehydrogenase, drosophila lebanonensis, short-chain dehydrogenases/reductases, ternary complex, nad- cyclohexanone adduct
  
• 1d9m.pdb. membrane protein 28-oct-99 1d9m (NMR, 20 structures)
  Title: solution structure of cecropin a(1-8)-magainin 2 hybrid peptide analogue(p2)
  Author: d. oh, y. kim
  Keywords: helix-hinge-helix, membrane protein
  
• 1qin.pdb. lyase 14-jun-99 1qin I Zn
  Title: human glyoxalase i complexed with s-(n-hydroxy-n-p- iodophenylcarbamoyl) glutathione
  Author: a. d. cameron, m. ridderstrom, b. olin, b. mannervik
  Keywords: lyase, lactoylglutathione lyase, glyoxalase i
  
• 1d9o.pdb. membrane protein 29-oct-99 1d9o (NMR, 20 structures)
  Title: solution structure of cecropin a(1-8)-magainin 2(1-12) hybrid peptide analogue(p3)
  Author: d. oh, y. kim
  Keywords: random-hinge-helix, membrane protein
  
• 1qoo.pdb. lectin 15-nov-99 1qoo Mn Ca
  Title: lectin uea-ii complexed with nag
  Author: r. loris, h. de greve, m. -h. dao-thi, j. messens, a. imberty, l. wyns
  Keywords: lectin, carbohydrate binding, n-acetylglucosamine