Recent PDB releases or updates: week of 15 September 1999

• 1cxq.pdb. transferase 30-aug-99 1cxq
  Title: atomic resolution asv integrase core domain from ammonium sulfate
  Author: j. lubkowski, z. dauter, f. yang, j. alexandratos, g. merkel, a. m. skalka, a. wlodawer
  Keywords: mixed beta-sheet surrounded by alpha-helices, transferase
  
• 1qka.pdb. complex (peptide transport/peptide) 07-jan-99 1qka U
  Title: oligo-peptide binding protein (oppa) complexed with krk
  Author: j. r. h. tame, a. j. wilkinson
  Keywords: complex (peptide transport/peptide), peptide transport
  
• 1cxr.pdb. plant protein 30-aug-99 1cxr (NMR, 10 structures)
  Title: automated 2d noesy assignment and structure calculation of crambin(s22/i25) with self-correcting distance geometry based noah/diamod programs
  Author: y. xu, j. wu, d. gorenstein, w. braun
  Keywords: crambin, crambe abyssinica, plant seed protein feb. 20, 1997, plant protein
  
• 1czb.pdb. transferase 01-sep-99 1czb
  Title: atomic resolution asv integrase core domain from hepes
  Author: j. lubkowski, z. dauter, f. yang, j. alexandratos, g. merkel, a. m. skalka, a. wlodawer
  Keywords: mixed beta-sheet surrounded by alpha-helices, transferase
  
• 1qkb.pdb. complex (peptide transport/peptide) 11-jan-99 1qkb U
  Title: oligo-peptide binding protein (oppa) complexed with kvk
  Author: j. r. h. tame, s. h. sleigh, a. j. wilkinson
  Keywords: complex (peptide transport/peptide), peptide transport
  
• 1c9s.pdb. rna binding protein/rna 03-aug-99 1c9s
  Title: crystal structure of a complex of trp rna-binding attenuation protein with a 53-base single stranded rna containing eleven gag triplets separated by au dinucleotides
  Author: a. a. antson, e. j. dodson, g. g. dodson, r. b. greaves, x. -p. chen, p. gollnick
  Keywords: trap, protein-rna complex, transcription, single stranded rna, rna binding protein/rna
  
• 1bud.pdb. toxin 03-sep-98 1bud Zn Ca
  Title: acutolysin a from snake venom of agkistrodon acutus at ph 5.0
  Author: w. gong, x. zhu, s. liu, m. teng, l. niu
  Keywords: metalloproteinase, snake venom, mmp, toxin
  
• 1cxu.pdb. transferase 30-aug-99 1cxu
  Title: 1.42a resolution asv integrase core domain from citrate
  Author: j. lubkowski, z. dauter, f. yang, j. alexandratos, a. wlodawer
  Keywords: mixed beta-sheet surrounded by alpha-helices, transferase
  
• 1cy5.pdb. apoptosis 31-aug-99 1cy5 Zn
  Title: crystal structure of the apaf-1 card
  Author: d. e. vaughn, l. joshua-tor
  Keywords: caspase recruitment domain, death fold, six alpha-helix bundle, greek key topology, apoptosis
  
• 1cw5.pdb. toxin 25-aug-99 1cw5 (NMR, 20 structures)
  Title: solution structure of carnobacteriocin b2
  Author: y. wang, m. e. henz, n. l. f. gallagher, s. chai, l. z. yan, a. c. gibbs, m. e. stiles, d. s. wishart, j. c. vederas
  Keywords: antimicrobial peptide, helix, bacteriocin, toxin
  
• 1cw6.pdb. toxin 25-aug-99 1cw6 (NMR, 18 structures)
  Title: refined solution structure of leucocin a
  Author: y. wang, m. e. henz, n. l. f. gallagher, s. chai, l. z. yan, a. c. gibbs, m. e. stiles, d. s. wishart, j. c. vederas
  Keywords: antimicrobial peptide, bacteriocin, toxin
  
• 1sw6.pdb. transcription regulation 28-sep-98 1sw6
  Title: s. cerevisiae swi6 ankyrin-repeat fragment
  Author: r. foord, i. a. taylor, s. g. sedgwick, s. j. smerdon
  Keywords: transcription regulation, ankyrin repeats, cell-cycle
  
• 1b8w.pdb. toxin 02-feb-99 1b8w (NMR)
  Title: defensin-like peptide 1
  Author: a. m. torres, x. wang, j. i. fletcher, d. alewood, p. f. alewood, r. smith, r. j. simpson, g. m. nicholson, s. k. sutherland, c. h. gallagher, g. f. king, p. w. kuchel
  Keywords: toxin, platypus
  
• 1c3w.pdb. ion transport 28-jul-99 1c3w
  Title: bacteriorhodopsin/lipid complex at 1.55 a resolution
  Author: h. luecke, j. k. lanyi, j. -p. cartailler
  Keywords: ion pump, membrane protein, retinal protein, lipids, photoreceptor, haloarchaea, 7-transmembrane, serpentine, ion transport, merohedral twinning
  
• 1qhw.pdb. hydrolase 26-mar-99 1qhw Zn Fe
  Title: purple acid phosphatase from rat bone
  Author: y. lindqvist, e. johansson, h. kaija, p. vihko, g. schneider
  Keywords: metal phosphatase, hydrolase
  
• 1cx8.pdb. metal transport 28-aug-99 1cx8 Sm
  Title: crytal structure of the ectodomain of human transferrin receptor
  Author: c. m. lawrence, s. ray, m. babyonyshev, r. galluser, d. borhani, s. c. harrison
  Keywords: human transferrin receptor, metal transport
  
• 1cxx.pdb. signaling protein 31-aug-99 1cxx Zn (NMR, minimized average structure)
  Title: mutant r122a of quail cysteine and glycine-rich protein, nmr, minimized structure
  Author: k. kloiber, r. weiskirchen, b. kraeutler, k. bister, r. konrat
  Keywords: lim domain containing proteins, metal-binding protein, signaling protein
  
• 1txx.pdb. oxidoreductase 07-apr-99 1txx Cu
  Title: active-site variant of e.coli thioredoxin
  Author: l. w. schultz, p. t. chivers, r. t. raines
  Keywords: oxidoreductase, redox, cxxc
  
• 2fgi.pdb. transferase 15-sep-98 2fgi
  Title: crystal structure of the tyrosine kinase domain of fgf receptor 1 in complex with inhibitor pd173074
  Author: m. mohammadi, s. froum, j. m. hamby, m. schroeder, r. l. panek, g. h. lu, a. v. eliseenkova, d. green, j. schlessinger, s. r. hubbard
  Keywords: protein kinase, tyrosine-protein kinase, atp-binding, phosphorylation, inhibitor, transferase
  
• 1bu9.pdb. hormone/growth factor 15-sep-98 1bu9 (NMR, 21 structures)
  Title: solution structure of p18-ink4c, 21 structures
  Author: i. -j. l. byeon, j. li, m. -d. tsai
  Keywords: cell cycle inhibitor, p18ink4c, tumor, suppressor, cyclin- dependent kinase, hormone/growth factor
  
• 1buy.pdb. cytokine 08-sep-98 1buy (NMR, minimized average structure)
  Title: human erythropoietin, nmr minimized average structure
  Author: j. c. cheetham, d. m. smith, k. h. aoki, j. l. stevenson, t. j. hoeffel, r. s. syed, j. egrie, t. s. harvey
  Keywords: cytokine, glycoprotein, growth factor
  
• 1b4y.pdb. deoxyribonucleic acid 30-dec-98 1b4y (NMR, 12 structures)
  Title: structure and mechanism of formation of the h-y5 isomer of an intramolecular dna triple helix.
  Author: m. j. p. van dongen, j. f. doreleijers, g. a. van der marel, j. h. van boom, c. w. hilbers, s. s. wijmenga
  Keywords: h-dna, triple helix, dna, deoxyribonucleic acid
  
• 1cxy.pdb. electron transport 31-aug-99 1cxy Fe
  Title: structure and characterization of ectothiorhodospira vacuolata cytochrome b558, a prokaryotic homologue of cytochrome b5
  Author: v. kostanjevecki, d. leys, g. van driessche, t. e. meyer, m. a. cusanovich, u. fischer, y. guisez, j. van beeumen
  Keywords: helix, beta-strand, electron transport
  
• 1cz9.pdb. transferase 01-sep-99 1cz9
  Title: atomic resolution asv integrase core domain (d64n) from citrate
  Author: j. lubkowski, z. dauter, f. yang, j. alexandratos, g. merkel, a. m. skalka, a. wlodawer
  Keywords: mixed beta-sheet surrounded by alpha-helices, transferase
  
• 2bkj.pdb. oxidoreductase 23-jul-98 2bkj
  Title: nadph:fmn oxidoreductase from vibrio harveyi complexed with nad+
  Author: j. j. tanner, s. -c. tu, k. l. krause
  Keywords: oxidoreductase, frp
  
• 1ckk.pdb. calmodulin-peptide complex 20-nov-98 1ckk Ca (NMR, 30 structures)
  Title: calmodulin/rat ca2+/calmodulin dependent protein kinase fragment
  Author: m. osawa, h. tokumitsu, m. b. swindells, h. kurihara, m. orita, t. shibanuma, t. furuya, m. ikura
  Keywords: complex (calmodulin/peptide), calmodulin, camkk, nmr, calmodulin-peptide complex
  
• 1hdm.pdb. immune system 09-sep-98 1hdm
  Title: histocompatibility antigen hla-dm
  Author: d. c. wiley, l. mosyak
  Keywords: histocompatibility protein, immune system