Recent PDB releases or updates: week of 1 September 1999

• 1bs0.pdb. transferase 31-aug-98 1bs0
  Title: plp-dependent acyl-coa synthase
  Author: d. alexeev, m. alexeeva, r. l. baxter, d. j. campopiano, s. p. webster, l. sawyer
  Keywords: plp-dependent acyl-coa synthase, biotin biosynthesis, 8- amino-7-oxonanoate synthase, 8-amino-7-ketopelargonate synthase, transferase
  
• 1ci0.pdb. oxidoreductase 06-apr-99 1ci0
  Title: pnp oxidase from saccharomyces cerevisiae
  Author: w. shi, d. a. ostrov, s. e. gerchman, v. graziano, h. kycia, b. studier, s. c. almo
  Keywords: oxidase, b6 metabolism, oxidoreductase
  
• 1cw1.pdb. oxidoreductase 25-aug-99 1cw1 Mn
  Title: crystal structure of isocitrate dehydrogenase mutant k230m bound to isocitrate and mn2+
  Author: r. stroud, j. finer-moore
  Keywords: oxidoreductase, isocitrate dehydrogenase, mutant
  
• 1qe1.pdb. transferase 12-jul-99 1qe1
  Title: crystal structure of 3tc-resistant m184i mutant of hiv-1 reverse transcriptase
  Author: s. g. sarafianos, k. das, j. ding, s. h. hughes, e. arnold
  Keywords: hiv, reverse transcriptase, 3tc, resistance, mutant, dna polymerase, transferase
  
• 1quq.pdb. dna-binding protein 02-jul-99 1quq
  Title: complex of replication protein a subunits rpa14 and rpa32
  Author: a. bochkarev, e. bochkareva, l. frappier, a. m. edwards
  Keywords: rpa, ob-fold, ssdna-binding, dna-binding protein
  
• 1qsa.pdb. transferase 20-jun-99 1qsa
  Title: crystal structure of the 70 kda soluble lytic transglycosylase slt70 from escherichia coli at 1.65 angstroms resolution
  Author: e. j. van asselt, a. -m. w. h. thunnissen, b. w. dijkstra
  Keywords: alpha-superhelix, transferase
  
• 1ddb.pdb. apoptosis 19-feb-99 1ddb (NMR)
  Title: structure of mouse bid, nmr, 20 structures
  Author: j. m. mcdonnell, d. fushman, c. milliman, s. j. korsmeyer, d. cowburn
  Keywords: apoptosis, programmed cell death, bcl-2 family, bh3 domain
  
• 1bs2.pdb. ligase 31-aug-98 1bs2
  Title: yeast arginyl-trna synthetase
  Author: j. cavarelli, b. delagouute, g. eriani, j. gangloff, d. moras
  Keywords: ligase, aminoacyl-trna synthetase, protein biosynthesis
  
• 1cs2.pdb. deoxyribonucleic acid 16-aug-99 1cs2 (NMR)
  Title: nmr structures of b-dna d(ctactgctttag).d(ctaaagcagtag)
  Author: s. leporc, o. mauffret, g. tevanian, e. lescot, m. monnot, s. fer
  Keywords: dna, double helix, modelling protocols, deoxyribonucleic acid
  
• 1c9r.pdb. transferase/immune system/dna 03-aug-99 1c9r
  Title: crystal structure of met184ile mutant of hiv-1 reverse transcriptase in complex with double stranded dna template- primer
  Author: s. g. sarafianos, k. das, e. arnold
  Keywords: hiv, reverse transcriptase, met184ile, 3tc, protein-dna complex, drug resistance, m184i, transferase/immune system/dna
  
• 1rk2.pdb. kinase 20-may-99 1rk2 Mg F Al
  Title: e. coli ribokinase complexed with ribose and adp, solved in space group p212121
  Author: j. a. sigrell, a. d. cameron, s. l. mowbray
  Keywords: carbohydrate kinase, ribose, transferase, induced fit, domain re-arrangements
  
• 1fxs.pdb. oxidoreductase 01-sep-98 1fxs
  Title: gdp-fucose synthetase from escherichia coli complex with nadp
  Author: w. s. somers, m. l. stahl, f. x. sullivan
  Keywords: epimerase-reductase, nadp, gdp-fucose, fucose synthetase, oxidoreductase
  
• 1cv3.pdb. hydrolase 22-aug-99 1cv3 Cl
  Title: t4 lysozyme mutant l121m
  Author: n. c. gassner, w. a. baase, j. lindstrom, j. lu, b. w. matthews
  Keywords: hydrolase (o-glycosyl), t4 lysozyme, methionine core mutant, protein engineering, protein folding
  
• 1cs3.pdb. gene regulation 16-aug-99 1cs3 Mg
  Title: structure of btb/poz transcription repression domain from promelocytic leukemia zinc finger oncoprotein
  Author: x. li, f. j. rauscher iii, r. marmorstein
  Keywords: btb/poz, plzf, transcription repression,oncoprotein, gene regulation
  
• 465d.pdb. deoxyribonucleic acid 14-apr-99 465d
  Title: structure of the topoisomerase ii poison bound to dna
  Author: a. adams, j. m. guss, c. a. collyer, w. a. denny, l. p. wakelin
  Keywords: topoisomerase ii poison, hexanucleotide, d(cgtacg)2, 9- amino-daca, deoxyribonucleic acid
  
• 4pgt.pdb. transferase 22-mar-99 4pgt
  Title: crystal structure of hgstp1-1[v104] complexed with the gsh conjugate of (+)-anti-bpde
  Author: x. ji, j. blaszczyk
  Keywords: transferase, pi class, hgstp1-1[v104], detoxification
  
• 3pgt.pdb. transferase 22-mar-99 3pgt
  Title: crystal structure of hgstp1-1[i104] complexed with the gsh conjugate of (+)-anti-bpde
  Author: x. ji, b. xiao
  Keywords: transferase, pi class, hgstp1-1[i104], detoxification
  
• 1bs4.pdb. hydrolase 01-sep-98 1bs4 Zn
  Title: peptide deformylase as zn2+ containing form (native) in complex with inhibitor polyethylene glycol
  Author: a. becker, i. schlichting, w. kabsch, d. groche, s. schultz, a. f. v. wagner
  Keywords: complex(enzyme/inhibitor), hydrolase, iron metalloprotease, protein synthesis
  
• 1cw4.pdb. oxidoreductase 25-aug-99 1cw4 Mn
  Title: crystal structure of k230m isocitrate dehydrogenase in complex with alpha-ketoglutarate
  Author: m. r. stroud, j. finer-moore
  Keywords: oxidoreductase, isocitrate dehydrogenase, mutant
  
• 1gce.pdb. hydrolase 17-may-99 1gce
  Title: structure of the beta-lactamase of enterobacter cloacae gc1
  Author: g. v. crichlow, a. p. kuzin, m. nukaga, t. sawai, j. r. knox
  Keywords: beta-lactam hydrolase, cephalosporinase, drug design, extended-spectrum beta-lactamase
  
• 1bs5.pdb. hydrolase 01-sep-98 1bs5 Zn
  Title: peptide deformylase as zn2+ containing form
  Author: a. becker, i. schlichting, w. kabsch, d. groche, s. schultz, a. f. v. wagner
  Keywords: hydrolase, iron metalloprotease; protein synthesis
  
• 1b4u.pdb. dioxygenase 29-dec-98 1b4u Fe
  Title: protocatechuate 4,5-dioxygenase (ligab) in complex with protocatechuate (pca)
  Author: k. sugimoto, t. senda, y. mitsui
  Keywords: extradiol type dioxygenase, protocatechuate, non-heme iron protein
  
• 1c4e.pdb. plant protein 27-jul-99 1c4e (NMR, 20 structures)
  Title: gurmarin from gymnema sylvestre
  Author: j. i. fletcher, a. j. dingley, g. f. king
  Keywords: gurmarin, sweet taste suppression, cystine knot, sweet taste transduction, plant protein
  
• 1bs6.pdb. hydrolase 01-sep-98 1bs6 Ni
  Title: peptide deformylase as ni2+ containing form in complex with tripeptide met-ala-ser
  Author: a. becker, i. schlichting, w. kabsch, d. groche, s. schultz, a. f. v. wagner
  Keywords: hydrolase, iron metalloprotease; protein synthesis
  
• 1bsv.pdb. oxidoreductase 31-aug-98 1bsv
  Title: gdp-fucose synthetase from escherichia coli complex with nadph
  Author: w. s. somers, m. l. stahl, f. x. sullivan
  Keywords: epimerase-reductase, nadph, gdp-fucose, oxidoreductase
  
• 1cqv.pdb. toxin 11-aug-99 1cqv Zn
  Title: crystal structure of staphylococcal enterotoxin c2 at 100k
  Author: d. kumaran, s. swaminathan
  Keywords: enterotoxin, superantigen, zinc binding, immune system
  
• 1qaf.pdb. oxidoreductase 11-mar-99 1qaf Cu Ca
  Title: the active site base controls cofactor reactivity in escherichia coli amine oxidase : x-ray crystallographic studies with mutational variants
  Author: j. m. murray, c. m. wilmot, c. g. saysell, j. jaeger, p. f. knowles, s. e. v. phillips, m. j. mcpherson
  Keywords: catalytic domain mainly anti-parallel beta sheet, three peripheral alpha-beta domains, oxidoreductase
  
• 3prg.pdb. nuclear receptor 24-aug-98 3prg
  Title: ligand binding domain of human peroxisome proliferator activated receptor
  Author: j. uppenberg, c. svensson, m. jaki, g. bertilsson, l. jendeberg, a. berkenstam
  Keywords: thiazolidinedione, nuclear receptor, transcription factor, adipocyte differentiation
  
• 1bs7.pdb. hydrolase 01-sep-98 1bs7 Ni
  Title: peptide deformylase as ni2+ containing form
  Author: a. becker, i. schlichting, w. kabsch, d. groche, s. schultz, a. f. v. wagner
  Keywords: hydrolase, iron metalloprotease; protein synthesis
  
• 1bsw.pdb. metal binding protein 31-aug-98 1bsw Zn Ca
  Title: acutolysin a from snake venom of agkistrodon acutus at ph 7.5
  Author: w. gong, x. zhu, s. liu, m. teng, l. niu
  Keywords: metalloproteinase, snake venom, mmp, metal binding protein
  
• 1ck7.pdb. hydrolase 28-apr-99 1ck7 Cl Zn Na Ca
  Title: gelatinase a (full-length)
  Author: e. morgunova, a. tuuttila, u. bergmann, m. isupov, y. lindqvist, g. schneider, k. tryggvason
  Keywords: hydrolase (metalloprotease), full-length, metalloproteinase, gelatinase a
  
• 1cw7.pdb. oxidoreductase 25-aug-99 1cw7 Mg
  Title: low temperature structure of wild-type idh complexed with mg-isocitrate
  Author: m. r. stroud, j. finer-moore
  Keywords: oxidoreductase, isocitrate dehydrogenase, mutant
  
• 1c4g.pdb. transferase 24-aug-99 1c4g Co V
  Title: phosphoglucomutase vanadate based transition state analog complex
  Author: s. baranidharan, w. j. ray jr.
  Keywords: phosphoglucomutase, phosphotransferase inhibitor substrate complex
  
• 2toh.pdb. hydroxylase 26-aug-98 2toh Cl Fe
  Title: tyrosine hydroxylase catalytic and tetramerization domains from rat
  Author: k. e. goodwill, c. sabatier, r. c. stevens
  Keywords: hydroxylase, neurotransmitter biosynthesis, non-heme iron, pterin co-substrate, catecholamine biosynthesis, oxidoreductase
  
• 1bs8.pdb. hydrolase 01-sep-98 1bs8 Zn
  Title: peptide deformylase as zn2+ containing form in complex with tripeptide met-ala-ser
  Author: a. becker, i. schlichting, w. kabsch, d. groche, s. schultz, a. f. v. wagner
  Keywords: hydrolase, iron metalloprotease; protein synthesis
  
• 1bsx.pdb. hormone/growth factor 31-aug-98 1bsx I
  Title: structure and specificity of nuclear receptor-coactivator interactions
  Author: r. l. wagner, b. d. darimont, j. w. apriletti, m. r. stallcup, p. j. kushner, j. d. baxter, r. j. fletterick, k. r. yamamoto
  Keywords: nuclear receptors, coactivators, grip1, specificity interaction site, hormone/growth factor
  
• 1bsz.pdb. hydrolase 01-sep-98 1bsz Fe
  Title: peptide deformylase as fe2+ containing form (native) in complex with inhibitor polyethylene glycol
  Author: a. becker, i. schlichting, w. kabsch, d. groche, s. schultz, a. f. v. wagner
  Keywords: complex(enzyme/inhibitor), hydrolase, iron metalloprotease, protein synthesis
  
• 1qak.pdb. oxidoreductase 15-mar-99 1qak Cu Ca
  Title: the active site base controls cofactor reactivity in escherichia coli amine oxidase : x-ray crystallographic studies with mutational variants
  Author: j. m. murray, c. m. wilmot, c. g. saysell, j. jaeger, p. f. knowles, s. e. v. phillips, m. j. mcpherson
  Keywords: oxidoreductase, copper, tpq, periplasmic, catalytic base mutant
  
• 1qal.pdb. oxidoreductase 19-mar-99 1qal Cu Ca
  Title: the active site base controls cofactor reactivity in escherichia coli amine oxidase : x-ray crystallographic studies with mutational variants
  Author: j. m. murray, c. m. wilmot, c. g. saysell, j. jaeger, p. f. knowles, s. e. v. phillips, m. j. mcpherson
  Keywords: mushroom shaped homodimer with mainly beta structure. there are 3 small peripheral alpha/beta domains., oxidoreductase
  
• 1qjm.pdb. lactoferrin 26-jun-99 1qjm Sm
  Title: crystal structure of a complex of lactoferrin with a lanthanide ion (sm3+) at 3.4 anstrom resolution
  Author: a. k. sharma, t. p. singh
  Keywords: lactoferrin, complex, iron binding, transferrin
  
• 1mun.pdb. dna repair 26-aug-98 1mun Fe
  Title: catalytic domain of muty from escherichia coli d138n mutant
  Author: y. guan, j. a. tainer
  Keywords: dna repair, dna g.a mismatch repair enzyme, glycosidase, hydrolase
  
• 1qgn.pdb. lyase 02-may-99 1qgn
  Title: cystathionine gamma-synthase from nicotiana tabacum
  Author: c. steegborn, a. messerschmidt, b. laber, w. streber, r. huber, t. clausen
  Keywords: methionine biosynthesis, pyridoxal 5'-phosphate, gamma- family, lyase
  
• 1rfn.pdb. coagulation factor 19-apr-99 1rfn Ca
  Title: human coagulation factor ixa in complex with p-amino benzamidine
  Author: k. -p. hopfner, a. lang, a. karcher, k. sichler, e. kopetzki, h. brandstetter, r. huber, w. bode, r. a. engh
  Keywords: serine proteinase, blood coagulation, coagulation factor
  
• 1bwo.pdb. lipid transfer protein 25-sep-98 1bwo
  Title: the crystal structure of wheat non-specific transfer protein complexed with two molecules of phospholipid at 2.1 a resolution
  Author: d. charvolin, c. cohen-addad, e. pebay-peyroula
  Keywords: lipid transfer protein, wheat, lipid binding, crystallography