Recent PDB releases or updates: week of 27 July 1999

• 1b3j.pdb. immune system 11-dec-98 1b3j
  Title: structure of the mhc class i homolog mic-a, a gammadelta t cell ligand
  Author: p. li, s. willie, s. bauer, d. morris, t. spies, r. strong
  Keywords: hc i homolog, human mica, mica, immunology, mhc, gamma- delta-tcr, glycoprotein, signa immunoglobulin fold, t-cell, immune system
  
• 1b45.pdb. toxin 05-jan-99 1b45 (NMR, 43 structures)
  Title: alpha-cnia conotoxin from conus consors, nmr, 43 structures
  Author: p. favreau, i. krimm, f. le gall, m. j. bobenrieth, h. lamthanh, f. bouet, d. servent, j. molgo, a. menez, y. letourneux, j. m. lancelin
  Keywords: alpha-conotoxin, conus consors, nicotinic acetylcholine receptor, toxin
  
• 1b6q.pdb. transcription regulation 16-jan-99 1b6q
  Title: alanine 31 proline mutant of rop protein
  Author: n. glykos, g. cesareni, m. kokkinidis
  Keywords: transcription regulation
  
• 1b0a.pdb. oxidoreductase,hydrolase 06-nov-98 1b0a
  Title: 5,10, methylene-tetrahydropholate dehydrogenase/cyclohydrolase from e coli.
  Author: b. w. shen, d. dyer, j. -y. huang, l. d'ari, j. rabinowitz, b. l. stoddard
  Keywords: folate, dehydrogenase, cyclcohydrolase, bifunctional, channeling, oxidoreductase,hydrolase
  
• 1b8p.pdb. oxidoreductase 02-feb-99 1b8p
  Title: malate dehydrogenase from aquaspirillum arcticum
  Author: s. y. kim, k. y. hwang, s. -h. kim, y. s. han, y. cho
  Keywords: dehydrogenase, oxidoreductase
  
• 1b8u.pdb. oxidoreductase 02-feb-99 1b8u
  Title: malate dehydrogenase from aquaspirillum arcticum
  Author: s. y. kim, k. y. hwang, s. -h. kim, y. s. han, y. cho
  Keywords: dehydrogenase, oxidoreductase
  
• 1b8v.pdb. oxidoreductase 02-feb-99 1b8v
  Title: malate dehydrogenase from aquaspirillum arcticum
  Author: s. y. kim, k. y. hwang, s. -h. kim, y. s. han, y. cho
  Keywords: dehydrogenase, oxidoreductase
  
• 1b79.pdb. hydrolase 28-jan-99 1b79
  Title: n-terminal domain of dna replication protein dnab
  Author: d. fass, c. e. bogden, j. m. berger
  Keywords: helicase, hexamer, dna replication, hydrolase
  
• 1caq.pdb. hydrolase 23-feb-99 1caq Zn Ca
  Title: x-ray structure of human stromelysin catalytic domain complexes with non-peptide inhibitors: implication for inhibitor selectivity
  Author: a. g. pavlovsky, m. g. williams, q. -z. ye, d. f. ortwine, c. f. purchase ii, a. d. white, v. dhanaraj, b. d. roth, l. l. johnson, d. hupe, c. humblet, t. l. blundell
  Keywords: matrix metalloproteinase, mmp-3, non-peptide inhibitor, hydrolase
  
• 1cfw.pdb. electron transport 22-mar-99 1cfw Ga
  Title: ga-substituted desulforedoxin
  Author: m. archer, a. l. carvalho, s. teixeira, i. moura, j. j. g. moura, f. rusnak, m. j. romao
  Keywords: rubredoxin type protein, electron transport
  
• 1cjf.pdb. structural regulation protein 13-apr-99 1cjf
  Title: profilin binds proline-rich ligands in two distinct amide backbone orientations
  Author: n. m. mahoney, a. a. fedorov, e. fedorov, d. a. rozwarski, s. c. almo
  Keywords: profilin, actin-binding protein, cytoskeleton, poly-l- proline, structural regulation protein
  
• 1b1a.pdb. isomerase 19-nov-98 1b1a (NMR, minimized average structure)
  Title: glutamate mutase (b12-binding subunit), nmr, minimized average structure
  Author: b. hoffmann, r. konrat, h. bothe, w. buckel, b. kraeutler
  Keywords: isomerase, glutamate mutase, b12-binding subunit
  
• 1b4k.pdb. lyase 22-dec-98 1b4k Mg
  Title: high resolution crystal structure of a mg2-dependent 5- aminolevulinic acid dehydratase
  Author: n. frankenberg, d. jahn, d. w. heinz
  Keywords: lyase, heme biosynthesis, magnesium, levulinic acid
  
• 1b87.pdb. transferase 09-feb-99 1b87
  Title: crystal structure of an aminoglycoside 6'-n- acetyltransferase
  Author: l. e. wybenga-groot, a. m. berghuis
  Keywords: aminoglycoside 6'-n-acetyltransferase, antibiotic resistance, acetyl coenzyme a
  
• 1b99.pdb. transferase 22-feb-99 1b99 F
  Title: 3'-fluoro-uridine diphosphate binding to nucleoside diphosphate kinase
  Author: j. janin, y. xu
  Keywords: phosphotransferase, antiviral agent, fluorouridine
  
• 1b9k.pdb. endocytosis 11-feb-99 1b9k
  Title: alpha-adaptin appendage domain, from clathrin adaptor ap2
  Author: d. j. owen, p. r. evans
  Keywords: endocytosis, adaptor
  
• 1ca7.pdb. cytokine 25-feb-99 1ca7
  Title: macrophage migration inhibitory factor (mif) with hydroxphenylpyruvate
  Author: j. b. lubetsky, e. lolis
  Keywords: protein hormone, cytokine, enzyme
  
• 1cb0.pdb. transferase 26-feb-99 1cb0
  Title: structure of human 5'-deoxy-5'-methylthioadenosine phosphorylase at 1.7 a resolution
  Author: t. c. appleby, m. d. erion, s. e. ealick
  Keywords: methylthioadenosine phosphorylase, purine nucleoside phosphorylase, purine salvage, adenine, transferase
  
• 1cb9.pdb. toxin 01-mar-99 1cb9 (NMR, 20 structures)
  Title: nmr structure with tightly bound water molecules of cytotoxin ii (cardiotoxin) from naja naja oxiana in aqueous solution (major form).
  Author: d. v. dementieva, e. v. bocharov, a. s. arseniev
  Keywords: cytoxin (cardiotoxin), membrane perturbation, cis/trans isomerization, bound water
  
• 1ccq.pdb. toxin 02-mar-99 1ccq (NMR, 20 structures)
  Title: nmr structure with tightly bound water molecules of cytotoxin ii (cardiotoxin) from naja naja oxiana in aqueous solution (minor form).
  Author: d. v. dementieva, e. v. bocharov, a. s. arseniev
  Keywords: cytotoxin (cardiotoxin), membrane perturbation, cis/trans isomerization, bound water
  
• 1cee.pdb. structural protein regulation 08-mar-99 1cee Mg (NMR, 20 structures)
  Title: solution structure of cdc42 in complex with the gtpase binding domain of wasp
  Author: n. abdul-manan, b. aghazadeh, g. a. liu, a. majumdar, o. ouerfelli, m. k. rosen
  Keywords: cdc42 actin regulator gtpase and the gtpase binding domain of its effector wasp, structural protein regulation
  
• 1cf0.pdb. complex (actin-binding protein/peptide) 23-mar-99 1cf0 I
  Title: human platelet profilin complexed with an l-pro10- iodotyrosine peptide
  Author: d. a. rozwarski, n. m. mahoney, s. c. almo
  Keywords: complex (actin-binding protein/peptide), profilin, poly-l- proline, actin cytoskeleton, complex (actin-binding protein/peptide)
  
• 1cg6.pdb. transferase 27-mar-99 1cg6
  Title: structure of human 5'-deoxy-5'-methylthioadenosine phosphorylase complexed with 5'-deoxy-5'- methylthioadenosine and sulfate at 1.7 a resolution
  Author: t. c. appleby, m. d. erion, s. e. ealick
  Keywords: methylthioadenosine phosphorylase, purine nucleoside phosphorylase, purine salvage, methylthioadenosine, sulfate, transferase
  
• 1ckt.pdb. gene regulation/dna 23-apr-99 1ckt Pt I
  Title: crystal structure of hmg1 domain a bound to a cisplatin- modified dna duplex
  Author: u. -m. ohndorf, m. a. rould, c. o. pabo, s. j. lippard
  Keywords: high-mobility group domain, bent dna, protein-drug-dna complex, gene regulation/dna
  
• 1cm0.pdb. signaling protein 12-may-99 1cm0
  Title: crystal structure of the pcaf/coenzyme-a complex
  Author: a. clements, j. r. rojas, r. c. trievel, l. wang, s. l. berger, r. marmorstein
  Keywords: p300/cbp associated factor, coenzyme a, acetyltransferase, coactivator, signaling protein
  
• 1cm7.pdb. oxidoreductase 17-may-99 1cm7
  Title: 3-isopropylmalate dehydrogenase from escherichia coli
  Author: g. wallon, g. kryger, s. t. lovett, t. oshima, d. ringe, g. a. petsko
  Keywords: oxidoreductase, dehydrogenase, nad-dependant enzyme, leucine biosynthetic pathway
  
• 1cp8.pdb. deoxyribonucleic acid 11-jun-99 1cp8 Mg (NMR, 1 structures)
  Title: nmr structure of dna (5'-d(ttggccaa)2-3') complexed with novel antitumor drug uch9
  Author: r. katahira, m. katahira, y. yamashita, h. ogawa, y. kyogoku, m. yoshida
  Keywords: dna, deoxyribonucleic acid
  
• 1cqe.pdb. oxidoreductase 15-jun-99 1cqe F Fe
  Title: prostaglandin h2 synthase-1 complex with flurbiprofen
  Author: d. picot, p. j. loll, a. m. mulichak, r. m. garavito
  Keywords: oxidoreductase, dioxygenase, peroxidase
  
• 1mxl.pdb. calcium-binding protein 22-apr-99 1mxl Ca (NMR, 40 structures)
  Title: structure of cardiac troponin c-troponin i complex
  Author: m. x. li, l. spyracopoulos, b. d. sykes
  Keywords: troponin, muscle contraction, regulatory protein, calcium- binding protein
  
• 1qbj.pdb. hydrolase/dna 22-apr-99 1qbj
  Title: crystal structure of the zalpha z-dna complex
  Author: t. schwartz, m. a. rould, a. rich
  Keywords: protein/z-dna complex, hydrolase/dna
  
• 1qhg.pdb. helicase 14-may-99 1qhg Mg
  Title: structure of dna helicase mutant with adpnp
  Author: p. soultanas, m. s. dillingham, s. s. velankar, d. b. wigley
  Keywords: dna repair, dna replication, sos response, helicase, atp- binding, dna-binding
  
• 1qhh.pdb. helicase 14-may-99 1qhh
  Title: structure of dna helicase with adpnp
  Author: p. soultanas, m. s. dillingham, s. s. velankar, d. b. wigley
  Keywords: dna repair, dna replication, sos response, helicase, atp- binding, dna-binding
  
• 1qjo.pdb. dihydrolipoamide acetyltransferase 08-jun-99 1qjo (NMR, 30 structures)
  Title: innermost lipoyl domain of the pyruvate dehydrogenase from escherichia coli
  Author: d. d. jones, m. j. howard, r. n. perham
  Keywords: lipoyl domain, pyruvate dehydrogenase
  
• 1qrk.pdb. transferase 14-jun-99 1qrk Sr
  Title: human factor xiii with strontium bound in the ion site
  Author: b. a. fox, v. c. yee, l. c. pederson, i. le trong, p. d. bishop, r. e. stenkamp, d. c. teller
  Keywords: transglutaminase, blood coagulation, calcium, strontium, transferase
  
• 1qry.pdb. dna-binding protein 16-jun-99 1qry (NMR, 20 structures)
  Title: homeobox protein vnd (ventral nervous system defective protein)
  Author: x. bosong
  Keywords: helix-turn-helix, dna-binding protein
  
• 1qs5.pdb. hydrolase 25-jun-99 1qs5 Cl
  Title: the introduction of strain and its effects on the structure and stability of t4 lysozyme
  Author: r. liu, w. a. baase, b. w. matthews
  Keywords: strain, stability, mutant, t4 lysozyme, hydrolase
  
• 1qs8.pdb. hydrolase 25-jun-99 1qs8
  Title: crystal structure of the p. vivax aspartic proteinase plasmepsin complexed with the inhibitor pepstatin a
  Author: n. khazanovich bernstein, m. m. cherney, c. a. yowell, j. b. dame, m. n. g. james
  Keywords: plasmepsin, aspartic proteinase, haemoglobinase, malaria, pepstatin a, hydrolase
  
• 1qs9.pdb. hydrolase 25-jun-99 1qs9
  Title: the introduction of strain and its effects on the structure and stability of t4 lysozyme
  Author: r. liu, w. a. baase, b. w. matthews
  Keywords: strain, stability, mutant, t4 lysozyme, hydrolase
  
• 1qsb.pdb. hydrolase 20-jun-99 1qsb Cl
  Title: the introduction of strain and its effects on the structure and stability of t4 lysozyme
  Author: r. liu, w. a. baase, b. w. matthews
  Keywords: strain, stability, mutant, t4 lysozyme, hydrolase
  
• 1qsh.pdb. oxygen storage/transport 22-jun-99 1qsh Mg Fe
  Title: magnesium(ii)-and zinc(ii)-protoporphyrin ix's stabilize the lowest oxygen affinity state of human hemoglobin even more strongly than deoxyheme
  Author: g. miyazaki, h. morimoto, k. -m. yun, s. -y. park, a. nakagawa, h. minagawa, n. shibayama
  Keywords: hemoglobin; oxygen affinity; allosteric effect; metal substitution; trigger mechanism, oxygen storage/transport
  
• 1qsi.pdb. oxygen storage/transport 22-jun-99 1qsi Mg Fe
  Title: magnesium(ii)-and zinc(ii)-protoporphyrin ix's stabilize the lowest oxygen affinity state of human hemoglobin even more strongly than deoxyheme
  Author: g. miyazaki, h. morimoto, k. -m. yun, s. -y. park, a. nakagawa, h. minagawa, n. shibayama
  Keywords: hemoglobin; oxygen affinity; allosteric effect; metal substitution; trigger mechanism; alpha co liganded, oxygen storage/transport
  
• 1qsl.pdb. transferase/dna 22-jun-99 1qsl Eu
  Title: klenow fragment complexed with single-stranded substrate and europium (iii) ion
  Author: c. a. brautigam, k. aschheim, t. a. steitz
  Keywords: exonuclease, two metal ions, single-stranded dna, transferase/dna
  
• 1qsq.pdb. hydrolase 22-jun-99 1qsq Cl
  Title: cavity creating mutation
  Author: n. c. gassner, w. a. baase, j. lindstrom, b. w. matthews
  Keywords: hydrolase (o-glycosyl), t4 lysozyme, cavity mutant, protein engineering, protein folding
  
• 1qtb.pdb. hydrolase 26-jun-99 1qtb
  Title: the introduction of strain and its effects on the structure and stability of t4 lysozyme
  Author: r. liu, w. a. baase, b. w. matthews
  Keywords: strain, stability, mutant, t4 lysozyme, hydrolase
  
• 1b6g.pdb. hydrolase 14-jan-99 1b6g Cl Pb
  Title: haloalkane dehalogenase at ph 5.0 containing chloride
  Author: i. s. ridder, h. j. rozeboom, b. w. dijkstra
  Keywords: hydrolase, haloalkane dehalogenase, alpha/beta-hydrolase
  
• 1qtr.pdb. hydrolase 28-jun-99 1qtr
  Title: crystal structure analysis of the prolyl aminopeptidase from serratia marcescens
  Author: t. yoshimoto, t. kabashima, k. uchikawa, t. inoue, n. tanaka
  Keywords: alpha beta hydrolase fold, proline, prolyl aminopeptidase, serratia, iminopeptidase
  
• 1toa.pdb. binding protein 03-mar-99 1toa Zn
  Title: periplasmic zinc binding protein troa from treponema pallidum
  Author: y. h. lee, r. k. deka, m. v. norgard, j. d. radolf, c. a. hasemann
  Keywords: periplasmic binding protein, zinc binding protein, abc transporter
  
• 2dfp.pdb. hydrolase 07-dec-98 2dfp
  Title: x-ray structure of aged di-isopropyl-phosphoro-fluoridate (dfp) bound to acetylcholinesterase
  Author: g. kryger, c. b. millard, i. silman, j. l. sussman
  Keywords: aged organophosphate, dfp, serine hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase
  
• 2hdc.pdb. gene regulation/dna 05-may-99 2hdc (NMR, 20 structures)
  Title: structure of transcription factor genesis/dna complex
  Author: c. jin, i. marsden, x. chen, x. liao
  Keywords: nmr, structure, dyanamics, genesis, winged helix protein, gene regulation/dna
  
• 2jhb.pdb. gene regulation 17-mar-99 2jhb (NMR, 20 structures)
  Title: core binding factor beta
  Author: x. huang, j. peng, n. a. speck, j. h. bushweller
  Keywords: core binding factor, transcription factor, gene regulation
  
• 1ckv.pdb. hydroxylase regulatory protein 25-apr-99 1ckv (NMR, 14 structures)
  Title: structure of the soluble methane monooxygenase regulatory protein b
  Author: k. j. walters, g. t. gassner, s. j. lippard, g. wagner
  Keywords: hydroxylase regulatory protein
  
• 1dcd.pdb. electron transport 20-mar-99 1dcd Cd
  Title: desulforedoxin complexed with cd2+
  Author: m. archer, a. l. carvalho, s. teixeira, m. j. romao
  Keywords: rubredoxin type protein, electron transport
  
• 1dhg.pdb. electron transport 22-mar-99 1dhg Hg
  Title: hg-substituted desulforedoxin
  Author: m. archer, a. l. carvalho, s. teixeira, i. moura, j. j. g. moura, f. rusnak, m. j. romao
  Keywords: rubredoxin type protein, electron transport
  
• 1fad.pdb. apoptosis 23-mar-99 1fad (NMR, 21 structures)
  Title: death domain of fas-associated death domain protein, residues 89-183
  Author: e. -j. jeong, s. bang, t. h. lee, y. -i. park, w. -s. sim, k. -s. kim
  Keywords: apoptosis, fadd, death domain
  
• 1qhi.pdb. transferase 12-may-99 1qhi
  Title: herpes simplex virus type-i thymidine kinase complexed with a novel non-substrate inhibitor, 9-(4-hydroxybutyl)-n2- phenylguanine
  Author: m. s. bennett, f. wien, j. n. champness, t. batuwangala, t. rutherford, w. c. summers, h. sun, g. wright, m. r. sanderson
  Keywords: transferase, transferase (phosphotransferase) thymidine, transferase ( phosphotransferase) thymidine kinase; viridae; ds-dna enveloped viruses; herpesviridae; alphaherpesvirinae novel inhibitor
  
• 1qi8.pdb. oxygen storage/transport 07-jun-99 1qi8 Fe
  Title: deoxygenated structure of a distal pocket hemoglobin mutant
  Author: a. e. miele, b. vallone, s. santanche, c. travaglini-allocatelli, a. bellelli, m. brunori
  Keywords: hemoglobin, blood substitute, low no reactivity, oxygen storage/transport
  
• 1qpp.pdb. chaperone 28-may-99 1qpp
  Title: crystal structures of self capping papd chaperone homodimers
  Author: d. l. hung, j. s. pinkner, s. d. knight, s. j. hultgren
  Keywords: beta barrel, immunoglobulin fold, chaperone
  
• 1qpx.pdb. chaperone 31-may-99 1qpx
  Title: crystal structures of self-capping papd chaperone homodimers
  Author: d. l. hung, j. s. pinkner, s. d. knight, s. j. hultgren
  Keywords: beta barrel, immunoglobulin fold, chaperone
  
• 1qt3.pdb. hydrolase 30-jun-99 1qt3 Cl
  Title: t26d mutant of t4 lysozyme
  Author: r. kuroki, l. h. weaver, b. w. matthews
  
  
• 1qt4.pdb. hydrolase 30-jun-99 1qt4 Cl
  Title: t26q mutant of t4 lysozyme
  Author: r. kuroki, l. h. weaver, b. w. matthews
  
  
• 1qt5.pdb. hydrolase 30-jun-99 1qt5
  Title: d20e mutant structure of t4 lysozyme
  Author: r. kuroki, l. h. weaver, b. w. matthews
  
  
• 1qt6.pdb. hydrolase 30-jun-99 1qt6 Cl
  Title: e11h mutant of t4 lysozyme
  Author: r. kuroki, l. h. weaver, b. w. matthews
  
  
• 1qt7.pdb. hydrolase 30-jun-99 1qt7 Cl
  Title: e11n mutant of t4 lysozyme
  Author: r. kuroki, l. h. weaver, b. w. matthews
  
  
• 1qt8.pdb. hydrolase 30-jun-99 1qt8
  Title: t26h mutant of t4 lysozyme
  Author: r. kuroki, l. h. weaver, b. w. matthews
  
  
• 1qtp.pdb. membrane protein 28-jun-99 1qtp
  Title: crystal structure of the ap-2 clathrin adaptor alpha- appendage
  Author: l. m. traub, m. a. downs, j. l. westrich, d. h. fremont
  Keywords: four-wavelength mad, selenomethionine, membrane protein
  
• 1qts.pdb. membrane protein 29-jun-99 1qts
  Title: crystal structure of the ap-2 clathrin adaptor alpha- appendage
  Author: l. m. traub, m. a. downs, j. l. westrich, d. h. fremont
  Keywords: membrane protein
  
• 1qtv.pdb. hydrolase 29-jun-99 1qtv Cl
  Title: t26e apo structure of t4 lysozyme
  Author: r. kuroki, l. h. weaver, b. w. matthews
  
  
• 1qtz.pdb. hydrolase 29-jun-99 1qtz
  Title: d20c mutant of t4 lysozyme
  Author: r. kuroki, l. h. weaver, b. w. matthews
  
  
• 1qud.pdb. hydrolase 01-jul-99 1qud Cl
  Title: l99g mutant of t4 lysozyme
  Author: j. wray, w. a. baase, j. d. lindstrom, a. r. poteete, b. w. matthews
  
  
• 1qug.pdb. hydrolase 01-jul-99 1qug Cl
  Title: e108v mutant of t4 lysozyme
  Author: j. wray, w. a. baase, j. d. lindstrom, a. r. poteete, b. w. matthews
  
  
• 1quh.pdb. hydrolase 01-jul-99 1quh Cl
  Title: l99g/e108v mutant of t4 lysozyme
  Author: j. wray, w. a. baase, j. d. lindstrom, a. r poteete, b. w. matthews
  
  
• 1quo.pdb. hydrolase 01-jul-99 1quo Cl
  Title: l99a/e108v mutant of t4 lysozyme
  Author: j. wray, w. a. baase, j. d. lindstrom, a. r. poteete, b. w. matthews
  
  
• 1sfi.pdb. complex (serine protease/inhibitor) 16-dec-98 1sfi Ca
  Title: high resolution structure of a potent, cyclic protease inhibitor from sunflower seeds
  Author: s. luckett, r. s. garcia, j. j. barker, a. v. konarev, p. shewry, a. r. clarke, r. l. brady
  Keywords: trypsin inhibitor, cyclic peptide, protease, bovine-trypsin, complex (serine protease/inhibitor)
  
• 1wwa.pdb. transferase 29-apr-99 1wwa
  Title: ngf binding domain of human trka receptor
  Author: c. wiesmann, m. h. ultsch, s. h. bass, a. m. de vos
  Keywords: trk receptor, receptor tyrosine kinase, 3d-domain swapping, transferase
  
• 1wwb.pdb. transferase 03-may-99 1wwb
  Title: ligand binding domain of human trkb receptor
  Author: c. wiesmann, m. h. ultsch, s. h. bass, a. m. de vos
  Keywords: trk receptor, receptor tyrosine kinase, 3d-domain swapping, transferase
  
• 1wwc.pdb. transferase 30-apr-99 1wwc
  Title: nt3 binding domain of human trkc receptor
  Author: m. h. ultsch, c. wiesmann, l. c. simmons, j. henrich, m. yang, d. reilly, s. h. bass, a. m. de vos
  Keywords: trk receptor, receptor tyrosine kinase, 3d-domain swapping, transferase
  
• 5crx.pdb. protein/dna 21-apr-99 5crx
  Title: asymmetric dna-bending in the cre-loxp site-specific recombination synapse
  Author: f. guo, d. n. gopaul, g. d. van duyne
  Keywords: cre recombinase, dna bending, site specific recombination, protein-dna interaction, protein/dna
  
• 1biw.pdb. hydrolase 19-jun-98 1biw Zn Ca
  Title: design and synthesis of conformationally-constrained mmp inhibitors
  Author: m. g. natchus, m. cheng, c. t. wahl, s. pikul, n. g. almstead, r. s. bradley, y. o. taiwo, g. e. mieling, c. m. dunaway, c. e. snider, j. m. mciver, b. l. barnett, s. j. mcphail, m. b. anastasio, b. de
  Keywords: stromelysin, matrix metalloprotease, osteoarthritis, structure-based drug design, protein crystal structure, hydrolase
  
• 1bvo.pdb. complex (transcription factor/dna) 16-sep-98 1bvo
  Title: dorsal homologue gambif1 bound to dna
  Author: p. cramer, a. varrot, c. barillas-mury, f. c. kafatos, c. w. mueller
  Keywords: transcription factor, rel protein, morphogen, immunity, development, insects, complex (transcription factor/dna)
  
• 1ega.pdb. hydrolase 01-dec-98 1ega
  Title: crystal structure of a widely conserved gtpase era
  Author: x. chen, x. ji
  Keywords: era, gtpase, rna-binding, ras-like, hydrolase
  
• 1mff.pdb. cytokine 19-oct-98 1mff
  Title: macrophage migration inhibitory factor y95f mutant
  Author: a. b. taylor, s. l. stamps, r. m. czerwinski, w. h. johnson junior, m. l. hackert, c. p. whitman
  Keywords: cytokine, macrophage, inflammatory response, tautomerase
  
• 1pjc.pdb. oxidoreductase 05-jun-98 1pjc
  Title: l-alanine dehydrogenase complexed with nad
  Author: p. j. baker, y. sawa, h. shibata, s. e. sedelnikova, d. w. rice
  Keywords: oxidoreductase, oxidoreductase, nad
  
• 1plu.pdb. lyase 04-jun-99 1plu Lu
  Title: pectate lyase c from erwinia chrysanthemi with 1 lu+3 ion in the putative calcium binding site
  Author: m. d. yoder, f. a. jurnak
  Keywords: pectate cleavage, pectinolytic activity, trans-elimination, parallel beta-helix, lyase
  
• 1qce.pdb. virus envelope protein 30-apr-99 1qce (NMR 30 structures)
  Title: solution nmr structure of ectodomain of siv gp41, restrained regularized mean structure plus 29 simulated annealing structures
  Author: g. m. clore
  Keywords: virus envelope protein, siv gp41 ectodomain
  
• 1qdm.pdb. hydrolase 19-may-99 1qdm
  Title: crystal structure of prophytepsin, a zymogen of a barley vacuolar aspartic proteinase.
  Author: j. kervinen, g. j. tobin, j. costa, d. s. waugh, a. wlodawer, a. zdanov
  Keywords: aspartic proteinases, phytepsin, saposin-like domain, zymogen structure, hydrolase
  
• 1qfd.pdb. inhibitor 08-apr-99 1qfd (NMR, 10 structures)
  Title: nmr solution structure of alpha-amylase inhibitor (aai)
  Author: s. lu, p. deng, x. liu, j. luo, r. han, x. gu, s. liang, x. wang, l. feng, v. lozanov, a. patthy, s. pongor
  Keywords: inhibitor
  
• 1qjz.pdb. coat protein (viral) 07-jul-99 1qjz
  Title: three dimensional structure of physalis mottle virus: implications for the viral assembly
  Author: s. s. krishna, c. n. hiremath, s. k. munshi, d. prahadeeswaran, m. sastri, h. s. savithri, m. r. n. murthy
  Keywords: coat protein (viral)
  
• 1qr6.pdb. oxidoreductase 18-jun-99 1qr6
  Title: human mitochondrial nad(p)-dependenent malic enzyme
  Author: y. xu, g. bhargava, h. wu, g. loeber, l. tong
  Keywords: four domains: a: mostly helical b: five-stranded parallel b- sheet (with new fold) surrounded by helices c: rossmann fold d: small domain with one helix and long c-terminal tail, oxidoreductase
  
• 1qrj.pdb. virus/viral protein 14-jun-99 1qrj (NMR)
  Title: solution structure of htlv-i capsid protein
  Author: s. khorasanizadeh, r. campos-olivas, c. a. clark, m. f. summers
  Keywords: htlv-i, capsid protein, retrovirus, two-domain protein, alpha helical protein, heteronuclear nmr spectroscopy, virus/viral protein
  
• 1qt2.pdb. fiber-forming protein 30-jun-99 1qt2 (theoretical model)
  Title: bundle forming pilin of enteropathogenic e. coli
  Author: r. chattopadhyaya, a. c. ghose
  Keywords: type 4b pilin, fiber forming protein, bundle forming pilin, enteropathogenic escherichia coli, adhesion, fiber-forming protein
  
• 1qtg.pdb. gene regulation 27-jun-99 1qtg (NMR)
  Title: averaged nmr model of switch arc, a double mutant of arc repressor
  Author: m. h. j. cordes, n. p. walsh, c. j. mcknight, r. t. sauer
  Keywords: beta-sheet, right-handed helix, structural change, gene regulation
  
• 2ffh.pdb. protein transport 29-jun-99 2ffh Cd
  Title: the signal sequence binding protein ffh from thermus aquaticus
  Author: r. j. keenan, d. m. freymann, p. walter, r. m. stroud
  Keywords: ffh, srp54, signal recognition particle, gtpase, m domain, rna-binding, signal sequence-binding, helix-turn-helix, protein targeting, protein transport
  
• 2hcc.pdb. chemokine 03-jul-98 2hcc (NMR, 30 structures)
  Title: solution structure of the human chemokine hcc-2, nmr, 30 structures
  Author: h. sticht, s. e. escher, k. schweimer, w. g. forssmann, p. roesch, k. adermann
  Keywords: chemokine, human, nmr structure, hcc-2, mip-5, leukotactin-1, chemotaxis, cc-chemokine
  
• 6pax.pdb. gene regulation/dna 22-apr-99 6pax
  Title: crystal structure of the human pax-6 paired domain-dna complex reveals a general model for pax protein-dna interactions
  Author: h. e. xu, m. a. rould, w. xu, j. a. epstein, r. l. maas, c. o. pabo
  Keywords: pax, paired domain, transcription, protein-dna interactions, gene regulation/dna
  
• 1b2p.pdb. sugar binding protein 30-nov-98 1b2p
  Title: native mannose-specific bulb lectin from scilla campanulata (bluebell) at 1.7 angstroms resolution
  Author: s. d. wood, l. m. wright, c. d. reynolds, p. j. rizkallah, a. k. allen, w. j. peumans, e. j. m. van damme
  Keywords: mannose-binding lectin, monocot, aglutinin, bluebell bulbs, protein-carbohydrate interactions, sugar binding protein
  
• 1qtk.pdb. hydrolase 28-jun-99 1qtk Cl Kr Na
  Title: crystal structure of hew lysozyme under pressure of krypton (55 bar)
  Author: t. prange, m. schiltz, l. pernot, n. colloc'h, s. longhi, w. bourguet, r. fourme
  Keywords: hydrophobic cavity, krypton complex, hydrolase
  
• 1b42.pdb. methyltransferase 05-jan-99 1b42
  Title: vaccinia methyltransferase vp39 complexed with m1ade and s-adenosylhomocysteine
  Author: g. hu, a. e. hodel, p. d. gershon, f. a. quiocho
  Keywords: methylated adenine, methyltransferase, rna cap analog, poly (a) polymerase, vaccinia, mrna processing, transcription, complex (transferase/rna cap analog)
  
• 1b50.pdb. chemokine 11-jan-99 1b50 (NMR, 10 structures)
  Title: nmr structure of human mip-1a d26a, 10 structures
  Author: j. p. waltho, l. d. higgins, c. j. craven, p. tan, t. dudgeon
  Keywords: chemokine, cytokine, chemotaxis
  
• 1b53.pdb. chemokine 11-jan-99 1b53 (NMR, minimized average structure)
  Title: nmr structure of human mip-1a d26a, minimized average structure
  Author: j. p. waltho, l. d. higgins, c. j. craven, p. tan, t. dudgeon
  Keywords: chemokine, cytokine, chemotaxis
  
• 1b65.pdb. hydrolase 20-jan-99 1b65
  Title: structure of l-aminopeptidase d-ala-esterase/amidase from ochrobactrum anthropi, a prototype for the serine aminopeptidases, reveals a new variant among the ntn hydrolase fold
  Author: c. bompard-gilles, v. villeret, l. fanuel, g. davies, b. joris, j. - m. frere, j. van beeumen
  Keywords: hydrolase, peptide degradation, ntn hydrolase
  
• 1b7d.pdb. toxin 21-jan-99 1b7d
  Title: neurotoxin (ts1) from brazilian scorpion tityus serrulatus
  Author: i. polikarpov, m. s. sanches jr. , s. marangoni, m. h. toyama, a. teplyakov
  Keywords: long-chain neurotoxin
  
• 1b92.pdb. transferase 19-feb-99 1b92 As
  Title: mobility of an hiv-1 integrase active site loop is correlated with catalytic activity
  Author: j. greenwald, v. le, s. l. butler, f. d. bushman, s. choe
  Keywords: dna integration, transferase
  
• 1b9d.pdb. transferase 11-feb-99 1b9d As
  Title: mobility of an hiv-1 integrase active site loop is correlated with catalytic activity
  Author: j. greenwald, v. le, s. l. butler, f. d. bushman, s. choe
  Keywords: dna integration, transferase
  
• 1b9f.pdb. trasferase 11-feb-99 1b9f As
  Title: mobility of an hiv-1 integrase active site loop is correlated with catalytic activity
  Author: j. greenwald, v. le, s. l. butler, f. d. bushman, s. choe
  Keywords: dna integration, trasferase
  
• 1bi0.pdb. repressor 21-jun-98 1bi0 Zn
  Title: structure of apo- and holo-diphtheria toxin repressor
  Author: e. pohl, w. g. j. hol
  Keywords: repressor, transcription regulation, dna-binding, iron
  
• 1bi9.pdb. aldehyde dehydrogenase 23-jun-98 1bi9 Cl
  Title: retinal dehydrogenase type two with nad bound
  Author: m. e. newcomer, a. l. lamb
  Keywords: aldehyde dehydrogenase, retinoid
  
• 1bjf.pdb. calcium-binding 25-jun-98 1bjf Ca
  Title: crystal structure of recombinant bovine neurocalcin delta at 2.4 angstroms
  Author: s. vijay-kumar, v. d. kumar
  Keywords: calcium-binding, myristoylation, neuronal specific guanylate cyclase activator
  
• 1bjw.pdb. aminotransferase 30-jun-98 1bjw
  Title: aspartate aminotransferase from thermus thermophilus
  Author: t. nakai, k. okada, s. kuramitsu, k. hirotsu
  Keywords: aminotransferase, pyridoxal enzyme
  
• 1bk7.pdb. hydrolase 15-jul-98 1bk7
  Title: ribonuclease mc1 from the seeds of bitter gourd
  Author: a. nakagawa, i. tanaka
  Keywords: hydrolase (nucleic acid, rna)
  
• 1bkg.pdb. aminotransferase 07-jul-98 1bkg
  Title: aspartate aminotransferase from thermus thermophilus with maleate
  Author: t. nakai, k. okada, s. kuramitsu, k. hirotsu
  Keywords: aminotransferase, pyridoxal enzyme
  
• 1bky.pdb. mrna processing 13-jul-98 1bky
  Title: vaccinia methyltransferase vp39 complexed with m1cyt and s-adenosylhomocysteine
  Author: g. hu, a. e. hodel, p. d. gershon, f. a. quiocho
  Keywords: methylated cytosine, methyltransferase, rna cap analog, poly(a) polymerase, vaccinia, mrna processing, transcription, complex (transferase/rna cap analog)
  
• 1bl6.pdb. transferase 11-jul-98 1bl6
  Title: the complex structure of the map kinase p38/sb216995
  Author: z. wang, b. j. canagarajah, j. c. boehm, s. kassis, m. h. cobb, p. r. young, s. abdel- meguid, j. l. adams, e. j. goldsmith
  Keywords: transferase, inhibitors, map kinase, serine/ threonine- protein kinase, p38
  
• 1bl7.pdb. transferase 23-jul-98 1bl7 F
  Title: the complex structure of the map kinase p38/sb220025
  Author: z. wang, b. j. canagarajah, j. c. boehm, s. kassis, m. h. cobb, p. r. young, s. abdel- meguid, j. l. adams, e. j. goldsmith
  Keywords: transferase, inhibitor, map kinase, serine/ threonine- protein kinase, p38
  
• 1blw.pdb. hormone/hormone receptor 21-jul-98 1blw
  Title: efficiency of signalling via cytokine receptors depends critically on receptor orientation.
  Author: r. s. syed, s. w. reid, c. li, j. c. cheetham, k. h. aoki, b. liu, h. zhan, t. d. osslund, a. j. chirino, j. zhang, j. finer-moore, s. elliott, k. sitney, b. a. katz, d. j. matthews, j. j. wendoloski, j. egrie, r. m. stroud
  Keywords: erythropoietin, erythropoietin receptor, epo, cytokine, cytokine class i receptor, hormone/hormone receptor
  
• 1bm0.pdb. carrier protein 28-jul-98 1bm0
  Title: crystal structure of human serum albumin
  Author: s. sugio, a. kashima, s. mochizuki, m. noda, k. kobayashi
  Keywords: carrier protein, albumin
  
• 1bmk.pdb. transferase 23-jul-98 1bmk F
  Title: the complex structure of the map kinase p38/sb218655
  Author: z. wang, b. canagarajah, j. c. boehm, s. kassis, m. h. cobb, p. r. young, s. abdel- meguid, j. l. adams, e. j. goldsmith
  Keywords: transferase, inhibitors, map kinase, serine/ threonine- protein kinase, p38
  
• 1bmy.pdb. dna binding protein 27-jul-98 1bmy (NMR, 10 structures)
  Title: human mrf-2 domain, nmr, 10 structures
  Author: y. -c. yuan, r. h. whitson, q. liu, k. itakura, y. chen
  Keywords: dna binding protein, mrf-2, dna-binding motif, protein-dna interaction
  
• 1bwc.pdb. oxidoreductase 23-sep-98 1bwc Cl
  Title: ajoene is an inhibitor and subversive substrate of human glutathione reductase and t. cruzi trypanothione reductase: crystallographic, kinetic, and spectroscopic studies
  Author: h. gallwitz, s. bonse, a. martinez-cruz, i. schlichting, k. schumacher, r. l. krauth- siegel
  Keywords: oxidoreductase, flavoenzyme, redox-active center
  
• 1bwm.pdb. immune system 23-sep-98 1bwm (NMR, 15 structures)
  Title: a single-chain t cell receptor
  Author: b. j. hare, d. f. wyss, e. l. reinherz, g. wagner
  Keywords: immunoglobulin, immunoreceptor, immune system
  
• 1byf.pdb. sugar binding protein 14-oct-98 1byf Zn Ca
  Title: structure of tc14; a c-type lectin from the tunicate polyandrocarpa misakiensis
  Author: s. f. poget, g. b. legge, m. bycroft, r. l. williams
  Keywords: c-type lectin, galactose-specific, sugar binding protein
  
• 1bzi.pdb. complex (fas/ligand) 29-oct-98 1bzi (theoretical model)
  Title: theoretical model of the cd95-ligand complex
  Author: j. bajorath
  Keywords: complex (fas/ligand), fas, receptor, fasl, apoptosis
  
• 1c00.pdb. hydrolase 13-jul-99 1c00 Ca
  Title: thermophylic pnb esterase
  Author: b. spiller, a. gershenson, f. arnold, r. stevens
  Keywords: alpha-beta hydrolase, pnb esterase, directed evolution, thermophile
  
• 1c0d.pdb. hydrolase 15-jul-99 1c0d
  Title: endocellulase e1 from acidothermus cellulolyticus mutant y245g
  Author: j. r. mccarley, r. m. lovett, j. sakon, m. e. himmel, j. o. baker
  Keywords: alpha/beta barrel, endo-1,4-beta-d-glucanase, hydrolase
  
• 1c0h.pdb. oxygen storage/transport 16-jul-99 1c0h Fe
  Title: bar-headed goose hemoglobin (aquomet form)
  Author: s. li, x. liu, h. jing, z. hua, r. zhang, g. lu
  Keywords: oxygen transport, heme, respiratory protein, erythrocyte, oxygen storage/transport
  
• 1c10.pdb. hydrolase 16-jul-99 1c10 Cl Na Xe
  Title: crystal structure of hew lysozyme under pressure of xenon (8 bar)
  Author: t. prange, m. schiltz, l. pernot, n. colloc'h, s. longhi, w. bourguet, r. fourme
  Keywords: hydrophobic cavity, xenon complex, hydrolase
  
• 1cf8.pdb. catalytic antibody 24-mar-99 1cf8 Cd
  Title: convergence of catalytic antibody and terpene cyclase mechanisms: polyene cyclization directed by carbocation-pi interactions
  Author: c. m. paschall, j. hasserodt, t. jones, r. a. lerner, k. d. janda, d. w. christianson
  Keywords: catalytic antibody, terpenoid synthase, carbocation, cyclization cascade
  
• 1cno.pdb. electron transport 03-aug-98 1cno Fe
  Title: structure of pseudomonas nautica cytochrome c552, by mad method
  Author: k. brown, d. nurizzo, c. cambillau
  Keywords: electron transport, pseudomonas nautica, x ray structure, multiwavelength anomalous dispersion, heme, cytochrome c
  
• 1dic.pdb. serine protease 08-jul-98 1dic
  Title: structure of 3,4-dichloroisocoumarin-inhibited factor d
  Author: l. b. cole, j. m. kilpatrick, n. chu, y. s. babu
  Keywords: serine protease, complement, factor d, hydrolase
  
• 1dqs.pdb. lyase 09-apr-98 1dqs Cl Zn
  Title: crystal structure of dehydroquinate synthase (dhqs) complexed with carbaphosphonate, nad+ and zn2+
  Author: e. p. carpenter, a. r. hawkins, j. w. frost, k. a. brown
  Keywords: shikimate pathway enzyme, multi-step enzyme, oxidoreductase, phosphate elimination, intra molecular aldol condensation, nad+ binding, zn2+ binding, lyase, cyclase, aromatic amino acid biosynthesis
  
• 1eh2.pdb. calcium binding 10-jul-98 1eh2 Ca (NMR, 20 structures)
  Title: structure of the second eps15 homology domain of human eps15, nmr, 20 structures
  Author: t. de beer, r. e. carter, k. e. lobel-rice, a. sorkin, m. overduin
  Keywords: calcium binding, signaling domain, npf binding, ef-hand, eh domain
  
• 1eqa.pdb. methyltransferase 05-jan-99 1eqa
  Title: vaccinia methyltransferase vp39 mutant e233q complexed with m7g and s-adenosylhomocysteine
  Author: g. hu, a. e. hodel, p. d. gershon, f. a. quiocho
  Keywords: transferase, methylated guanosine, methyltransferase, rna cap analog, poly(a) polymerase, vaccinia, mrna processing, transcription, complex (transferase/rna cap analog)
  
• 1euh.pdb. oxidoreductase 05-nov-98 1euh
  Title: apo form of a nadp dependent aldehyde dehydrogenase from streptococcus mutans
  Author: d. cobessi, f. tete-favier, s. marchal, g. branlant, a. aubry
  Keywords: dehydrogenase, oxidoreductase
  
• 1fce.pdb. cellulase degradation 06-jul-98 1fce Ca
  Title: processive endocellulase celf of clostridium cellulolyticum
  Author: g. parsiegla, m. juy, r. haser
  Keywords: cellulase degradation, family 48, thiooligosaccharide inhibitor, processive endo action, hydrolase
  
• 1fun.pdb. oxidoreductase 23-jul-98 1fun Cu Zn
  Title: superoxide dismutase mutant with lys 136 replaced by glu, cys 6 replaced by ala and cys 111 replaced by ser (k136e, c6a, c111s)
  Author: t. p. lo, j. a. tainer, e. d. getzoff
  Keywords: oxidoreductase, superoxide acceptor
  
• 1gnk.pdb. signaling protein 14-jul-98 1gnk
  Title: glnk, a signal protein from e. coli
  Author: y. xu, e. cheah, p. d. carr, w. c. vanheeswijk, h. v. westerhoff, s. g. vasudevan, d. l. ollis
  
  
• 1kp6.pdb. toxin 28-may-99 1kp6
  Title: ustilago maydis killer toxin kp6 alpha-subunit
  Author: n. li, m. erman, w. pangborn, w. l. duax, c. -m. park, j. bruenn, d. ghosh
  Keywords: killer toxin, ion channel modulator
  
• 1lkf.pdb. toxin 28-jul-98 1lkf
  Title: leukocidin f (hlgb) from staphylococcus aureus
  Author: r. olson, h. nariya, k. yokota, y. kamio, j. e. gouaux
  Keywords: leukotoxin, hemolysin, pore-forming toxin
  
• 1lyw.pdb. aspartic protease 30-jun-98 1lyw
  Title: cathepsin d at ph 7.5
  Author: a. y. lee, s. v. gulnik, j. w. erickson
  Keywords: aspartic protease, hydrolase, glycoprotein
  
• 1mkp.pdb. hydrolase 11-jul-98 1mkp Cl
  Title: crystal structure of pyst1 (mkp3)
  Author: a. e. stewart, s. dowd, s. keyse, n. q. mcdonald
  Keywords: hydrolase
  
• 1nf1.pdb. signaling protein 08-jul-98 1nf1
  Title: the gap related domain of neurofibromin
  Author: k. scheffzek, m. r. ahmadian, l. wiesmueller, w. kabsch, p. stege, f. schmitz, a. wittinghofer
  Keywords: neurofibromin, type i neurofibromatosis, nf1, ras, gap, signal transduction, cancer, growth regulation, gtp hydrolysis, patient mutation, arginine finger, signaling protein
  
• 1oco.pdb. oxidoreductase 09-jul-98 1oco Mg Cu Zn Na Fe
  Title: bovine heart cytochrome c oxidase in carbon monoxide-bound state
  Author: t. tsukihara, m. yao
  Keywords: oxidoreductase (cytochrome(c)-oxygen), cytochrome c oxidase, carbon monoxide-bound
  
• 1ocz.pdb. oxidoreductase 13-jul-98 1ocz Mg Cu Zn Na Fe
  Title: bovine heart cytochrome c oxidase in azide-bound state
  Author: t. tsukihara, m. yao
  Keywords: oxidoreductase (cytochrome(c)-oxygen), cytochrome c oxidase, azide-bound
  
• 1osm.pdb. outer membrane protein 08-jan-99 1osm
  Title: osmoporin (ompk36) from klebsiella pneumoniae
  Author: r. dutzler, t. schirmer
  Keywords: outer membrane protein, non-specific porin, osmoporin, beta-barrel, transmembrane
  
• 1pym.pdb. phosphotransferase 25-feb-99 1pym Mg Se
  Title: phosphoenolpyruvate mutase from mollusk in with bound mg2- oxalate
  Author: k. huang, z. li, o. herzberg
  Keywords: phosphotransferase, phosphomutase, p-c bond formation
  
• 1qaz.pdb. lyase 08-apr-99 1qaz
  Title: crystal structure of alginate lyase a1-iii from sphingomonas species a1 at 1.78a resolution
  Author: h. -j. yoon
  Keywords: alginate lyase, crystals, x-ray structure
  
• 1qb7.pdb. transferase 30-apr-99 1qb7 Mg
  Title: crystal structures of adenine phosphoribosyltransferase from leishmania donovani.
  Author: c. l. phillips, b. ullman, r. g. brennan, c. p. hill
  Keywords: dinucleotide binding fold, transferase
  
• 1qb8.pdb. transferase 30-apr-99 1qb8 Mg
  Title: crystal structures of adenine phosphoribosyltransferase from leishmania donovani
  Author: c. p. hill, c. l. phillips
  Keywords: dinucleotide binding fold, transferase
  
• 1qcc.pdb. transferase 01-may-99 1qcc
  Title: crystal structures of adenine phosphoribosyltransferase from leishmania donovani
  Author: c. l. phillips, b. ullman, r. g. brennan, c. p. hill
  Keywords: dinucleotide binding fold, transferase
  
• 1qcd.pdb. transferase 01-may-99 1qcd
  Title: crystal structures of adenine phosphoribosyltransferase from leishmania donovani
  Author: c. l. phillips, b. ullman, r. g. brennan, c. p. hill
  Keywords: dinucleotide binding fold, transferase
  
• 1qe3.pdb. hydrolase 12-jul-99 1qe3 Zn
  Title: pnb esterase
  Author: b. spiller, a. gershenson, f. arnold, r. stevens
  Keywords: alpha-beta hydrolase directed evolution
  
• 1qe8.pdb. hydrolase 13-jul-99 1qe8 K
  Title: pnb esterase 56c8
  Author: b. spiller, a. gershenson, f. arnold, r. c. stevens
  Keywords: alpha-beta hydrolase, directed evolution, organic activity, pnb esterase
  
• 1qhj.pdb. photoreceptor 04-may-99 1qhj
  Title: x-ray structure of bacteriorhodopsin grown in lipidic cubic phases
  Author: h. belrhali, p. nollert, a. royant, c. menzel, j. p. rosenbusch, e. m. landau, e. pebay- peyroula
  Keywords: photoreceptor, proton pump, membrane protein, retinal protein, lipidic cubic phases, purple membrane, archeal lipids
  
• 1qju.pdb. rhinovirus coat protein 05-jul-99 1qju Zn
  Title: human rhinovirus 16 coat protein in complex with antiviral compound vp61209
  Author: a. t. hadfield, i. minor, g. diana, m. g. rossmann
  Keywords: rhinovirus coat protein, human rhinovirus 16, antiviral compound, drug, win compound
  
• 1qjx.pdb. rhinovirus coat protein 06-jul-99 1qjx Zn
  Title: human rhinovirus 16 coat protein in complex with antiviral compound win68934
  Author: a. t. hadfield, g. diana, m. g. rossmann
  Keywords: rhinovirus coat protein, human rhinovirus 16, antiviral compound, drug, win compound
  
• 1qjy.pdb. rhinovirus coat protein 06-jul-99 1qjy Zn
  Title: human rhinovirus 16 coat protein in complex with antiviral compound vp65099
  Author: a. t. hadfield, g. diana, m. g. rossmann
  Keywords: rhinovirus coat protein, human rhinovirus 16, antiviral compound, drug, win compound
  
• 1qkf.pdb. ribosomal protein 19-jul-99 1qkf (NMR, minimized average structure)
  Title: solution structure of the ribosomal protein s19 from thermus thermophilus
  Author: m. helgstrand, a. v. rak, p. allard, n. davydova, m. b. garber, t. hard
  Keywords: ribosome, ribosomal protein, thermus thermophilus, s19
  
• 1qkh.pdb. ribosomal protein 20-jul-99 1qkh (NMR, 21 structures)
  Title: solution structure of the ribosomal protein s19 from thermus thermophilus
  Author: m. helgstrand, a. v. rak, p. allard, n. davydova, m. b. garber, t. hard
  Keywords: ribosome, ribosomal protein, thermus thermophilus, s19
  
• 1qsg.pdb. oxidoreductase 21-jun-99 1qsg Cl
  Title: crystal structure of enoyl reductase inhibition by triclosan
  Author: m. j. stewart, s. parikh, g. xiao, p. j. tonge, c. kisker
  Keywords: enoyl reductase, oxidoreductase
  
• 1qtc.pdb. hydrolase 26-jun-99 1qtc Cl
  Title: the introduction of strain and its effects on the structure and stability of t4 lysozyme
  Author: r. liu, w. a. baase, b. w. matthews
  Keywords: strain, stability, mutant, t4 lysozyme, hydrolase
  
• 1qtd.pdb. hydrolase 27-jun-99 1qtd
  Title: the introduction of strain and its effects on the structure and stability of t4 lysozyme
  Author: r. liu, w. a. baase, b. w. matthews
  Keywords: strain, stability, mutant, t4 lysozyme, hydrolase
  
• 1qth.pdb. hydrolase 28-jun-99 1qth
  Title: the introduction of strain and its effects on the structure and stability of t4 lysozyme
  Author: r. liu, w. a. baase, b. w. matthews
  Keywords: strain, stability, mutant, t4 lysozyme, hydrolase
  
• 1qtl.pdb. isomerase/immune system 28-jun-99 1qtl
  Title: crystal structure of the cyclophilin-like domain from brugia malayi complexed with cyclosporin a
  Author: p. j. ellis, c. k. s. carlow, d. ma, p. kuhn
  Keywords: isomerase, peptidyl-prolyl cis-trans, peptidylprolyl isomerase, cyclosporin, isomerase/immune system
  
• 1tlg.pdb. lectin 16-oct-98 1tlg Zn Ca
  Title: structure of a tunicate c-type lectin complexed with d-galactose
  Author: s. f. poget, g. b. legge, m. bycroft, r. l. williams
  Keywords: c-type lectin, galactose-specific, carbohydrate binding
  
• 1tux.pdb. hydrolase 29-oct-98 1tux
  Title: high resolution crystal structure of a thermostable xylanase from thermoascus aurantiacus
  Author: r. natesh, p. bhanumoorthy, p. j. vithayathil, k. sekar, s. ramakumar, m. a. viswamitra
  Keywords: xylan degradation, hydrolase, glycosidase, enzyme, 1,4-beta-xylan xylanohydrolase
  
• 1viw.pdb. complex (glycosidase/inhibitor) 21-jul-98 1viw Cl Ca
  Title: tenebrio molitor alpha-amylase-inhibitor complex
  Author: v. nahoum, m. p. egloff, f. payan
  Keywords: complex (glycosidase/inhibitor), hydrolase, lectin, insect alpha-amylase, inhibitors
  
• 1xbd.pdb. hydrolase 16-oct-98 1xbd (NMR, 5 structures)
  Title: internal xylan binding domain from cellulomonas fimi xylanase d, nmr, 5 structures
  Author: p. j. simpson, d. n. bolam, a. cooper, a. ciruela, g. p. hazlewood, h. j. gilbert, m. p. williamson
  Keywords: hydrolase, xylan binding domain, xylanase, beta-sheet
  
• 1xpa.pdb. dna repair 06-jul-98 1xpa Zn (NMR, 1 structure)
  Title: solution structure of the dna- and rpa-binding domain of the human repair factor xpa, nmr, 1 structure
  Author: t. ikegami, i. kuraoka, m. saijo, n. kodo, y. kyogoku, k. morikawa, k. tanaka, m. shirakawa
  Keywords: dna repair, nucleotide excision repair, zinc-finger
  
• 2ans.pdb. lipid-binding protein 19-jan-99 2ans Cl
  Title: adipocyte lipid binding protein complexed with 1-anilino-8-naphthalene sulfonate
  Author: j. j. ory, l. j. banaszak
  Keywords: lipid-binding protein, fluorescent probe
  
• 2c17.pdb. oxidoreductase 02-jun-99 2c17 Fe (theoretical model)
  Title: computational model of human p450c17
  Author: r. j. auchus, w. l. miller
  Keywords: 17-alpha-hydroxylase, 17/20-lyase, p450c17, sex steroid biosynthesis, oxidoreductase
  
• 2cnp.pdb. calcium-binding protein 07-jan-99 2cnp (NMR, 22 structures)
  Title: high resolution solution structure of apo rabbit calcyclin, nmr, 22 structures
  Author: l. maler, b. c. m. potts, w. j. chazin
  Keywords: calcium-binding protein, ef-hand, s-100 protein, nmr, signal transduction
  
• 2euh.pdb. oxidoreductase 05-nov-98 2euh
  Title: holo form of a nadp dependent aldehyde dehydrogenase complex with nadp+
  Author: d. cobessi, f. tete-favier, s. marchal, g. branlant, a. aubry
  Keywords: oxidoreductase, dehydrogenase
  
• 2g3p.pdb. coat protein 27-oct-98 2g3p
  Title: structure of the n-terminal two domains of the infectivity protein g3p of filamentous phage fd
  Author: p. holliger, r. l. williams
  Keywords: infection, filamentous phage, pilus binding, beta barrel, conformational change
  
• 2gnk.pdb. signaling protein 14-jul-98 2gnk
  Title: glnk, a signal protein from e. coli
  Author: y. xu, e. cheah, p. d. carr, w. c. vanheeswijk, h. v. westerhoff, s. g. vasudevan, d. l. ollis
  
  
• 2lkf.pdb. toxin 28-jul-98 2lkf
  Title: leukocidin f (hlgb) from staphylococcus aureus
  Author: r. olson, h. nariya, k. yokota, y. kamio, j. e. gouaux
  Keywords: leukotoxin, hemolysin, pore-forming toxin
  
• 2prg.pdb. complex (thiazolidinedione/receptor) 14-aug-98 2prg
  Title: ligand-binding domain of the human peroxisome proliferator activated receptor gamma
  Author: r. t. nolte, g. b. wisely, m. v. milburn
  Keywords: complex (thiazolidinedione/receptor), ligand-binding domain, nuclear receptor, apo, transcription factor, orphan receptor
  
• 2src.pdb. tyrosine-protein kinase 29-dec-98 2src
  Title: crystal structure of human tyrosine-protein kinase c-src, in complex with amp-pnp
  Author: w. xu, a. doshi, m. lei, m. j. eck, s. c. harrison
  Keywords: src, tyrosine-protein kinase, phosphorylation, sh2, sh3, phosphotyrosine, proto-oncogene, phosphotransferase
  
• 2xbd.pdb. hydrolase 27-oct-98 2xbd (NMR, minimized average structure)
  Title: internal xylan binding domain from cellulomonas fimi xylanase d, nmr, minimized average structure
  Author: p. j. simpson, d. n. bolam, a. cooper, a. ciruela, g. p. hazlewood, h. j. gilbert, m. p. williamson
  Keywords: hydrolase, xylan binding domain, xylanase, beta-sheet
  
• 3erk.pdb. transferase 09-jul-98 3erk F
  Title: the complex structure of the map kinase erk2/sb220025
  Author: z. wang, b. canagarajah, j. c. boehm, m. h. cobb, p. r. young, s. abdel-meguid, j. l. adams, e. j. goldsmith
  Keywords: transferase, serine/threonine-protein kinase, map kinase, erk2
  
• 3lkf.pdb. toxin 28-jul-98 3lkf
  Title: leukocidin f (hlgb) from staphylococcus aureus with phosphocholine bound
  Author: r. olson, h. nariya, k. yokota, y. kamio, j. e. gouaux
  Keywords: leukotoxin, hemolysin, pore-forming toxin
  
• 3mag.pdb. mrna processing 12-jul-98 3mag
  Title: vaccinia methyltransferase vp39 complexed with m3ade and s-adenosylhomocysteine
  Author: g. hu, a. e. hodel, p. d. gershon, f. a. quiocho
  Keywords: methylated adenine, methyltransferase, rna cap analog, poly (a) polymerase, vaccinia, mrna processing, transcription, complex (transferase/rna cap analog)
  
• 3mct.pdb. methyltransferase 05-jan-99 3mct
  Title: vaccinia methyltransferase vp39 complexed with m3cyt and s-adenosylhomocysteine
  Author: g. hu, p. d. gershon, a. e. hodel, f. a. quiocho
  Keywords: methylated cytosine, methyltransferase, rna cap analog, poly(a) polymerase, vaccinia, mrna processing, transcription, complex (transferase/rna cap analog)
  
• 3ncm.pdb. cell adhesion protein 21-sep-98 3ncm (NMR, 20 structures)
  Title: neural cell adhesion molecule, module 2, nmr, 20 structures
  Author: p. h. jensen, v. soroka, n. k. thomsen, v. berezin, e. bock, f. m. poulsen
  Keywords: cell adhesion, glycoprotein, heparin-binding, gpi-anchor, neural adhesion molecule, immunoglobulin fold, homophilic binding, cell adhesion protein
  
• 476d.pdb. deoxyribonucleic acid 25-jun-99 476d Ca
  Title: calcium form of b-dna undecamer gcgaattcgcg
  Author: g. minasov, v. tereshko, m. egli
  Keywords: b-dna dodecamer, calcium form, deoxyribonucleic acid
  
• 477d.pdb. deoxyribonucleic acid 25-jun-99 477d Ca
  Title: calcium form of the b-dna dodecamer ggcgaattcgcg
  Author: g. minasov, v. tereshko, m. egli
  Keywords: b-dna dodecamer, calcium form, deoxyribonucleic acid
  
• 478d.pdb. deoxyribonucleic acid 26-jun-99 478d F Ca
  Title: crystal structure of the b-dna dodecamer 5'-d(cgcgaa(taf) tcgcg), where taf is 2'-deoxy-2'-fluoro-arabino-furanosyl thymine
  Author: g. minasov, v. tereshko, m. egli
  Keywords: b-dna dodecamer duplex, calcium crystal form, deoxyribonucleic acid
  
• 4a3h.pdb. hydrolase 22-jul-98 4a3h F
  Title: 2',4' dinitrophenyl-2-deoxy-2-fluro-b-d-cellobioside complex of the endoglucanase cel5a from bacillus agaradhaerens at 1.6 a resolution
  Author: g. j. davies, a. m. brzozowski, k. andersen, m. schulein, l. mackenzie, s. g. withers
  Keywords: hydrolase, cellulose degradation, endoglucanase, glycoside hydrolase family 5, michaelis complex. skew-boat, distortion
  
• 4dcg.pdb. mrna processing 13-jul-98 4dcg
  Title: vaccinia methyltransferase vp39 mutant d182a complexed with m7g and s-adenosylhomocysteine
  Author: g. hu, a. e. hodel, p. d. gershon, f. a. quiocho
  Keywords: methylated guanosine, methyltransferase mutant d182a, rna cap analog, poly(a) polymerase, vaccinia, mrna processing, transcription, complex (transferase/rna cap analog)
  
• 4erk.pdb. transferase 09-jul-98 4erk
  Title: the complex structure of the map kinase erk2/olomoucine
  Author: z. wang, b. canagarajah, j. c. boehm, m. h. cobb, p. r. young, s. abdel-meguid, j. l. adams, e. j. goldsmith
  Keywords: transferase, serine/threonine-protein kinase, map kinase, erk2
  
• 4eug.pdb. hydrolase 27-dec-98 4eug
  Title: crystallographic and enzymatic studies of an active site variant h187q of escherichia coli uracil dna glycosylase: crystal structures of mutant h187q and its uracil complex
  Author: g. xiao, m. tordova, a. c. drohat, j. jagadeesh, j. t. stivers, g. l. gilliland
  Keywords: glycosylase, hydrolase
  
• 5a3h.pdb. hydrolase 23-jul-98 5a3h F
  Title: 2-deoxy-2-fluro-b-d-cellobiosyl/enzyme intermediate complex of the endoglucanase cel5a from bacillus agaradhearans at 1.8 angstroms resolution
  Author: g. j. davies, a. varrot, m. dauter, a. m. brzozowski, m. schulein, l. mackenzie, s. g. withers
  Keywords: hydrolase, cellulose degradation, endoglucanase, glycoside hydrolase family 5, michaelis complex, skew-boat, distortion
  
• 5eug.pdb. hydrolase 27-dec-98 5eug
  Title: crystallographic and enzymatic studies of an active site variant h187q of escherichia coli uracil dna glycosylase: crystal structures of mutant h187q and its uracil complex
  Author: g. xiao, m. tordova, a. c. drohat, j. jagadeesh, j. t. stivers, g. l. gilliland
  Keywords: glycosylase, hydrolase
  
• 5gcn.pdb. transferase 24-mar-99 5gcn (NMR, 24 structures)
  Title: catalytic domain of tetrahymena gcn5 histone acetyltransferase in complex with coenzyme a
  Author: y. lin, c. m. fletcher, j. zhou, c. d. allis, g. wagner
  Keywords: histone acetyltransferase, chromatin remodeling, transcription regulation
  
• 6a3h.pdb. hydrolase 22-jul-98 6a3h F
  Title: 2-deoxy-2-fluro-b-d-cellotriosyl/enzyme intermediate complex of the endoglucanase cel5a from bacillus agaradhearans at 1.6 angstrom resolution
  Author: g. j. davies, a. varrot, m. dauter, a. m. brzozowski, m. schulein, l. mackenzie, s. g. withers
  Keywords: hydrolase, cellulose degradation, endoglucanase, glycoside hydrolase family 5, michaelis complex, skew-boat, distortion
  
• 9atc.pdb. transferase 26-jun-98 9atc Zn
  Title: atcase y165f mutant
  Author: y. ha, n. m. allewell
  Keywords: atcase, allostery, pyrimidine biosynthesis, transferase