| AddRefinableObj(RefinableObj &) | ObjCryst::OptimizationObj | |
| BuildRecursiveRefObjList() | ObjCryst::OptimizationObj | [protected] |
| DisplayReport() | ObjCryst::OptimizationObj | [virtual] |
| FixAllPar() | ObjCryst::OptimizationObj | |
| GetBestCost() const | ObjCryst::OptimizationObj | |
| GetBestCost() | ObjCryst::OptimizationObj | |
| GetClassName() const | ObjCryst::MonteCarloObj | [virtual] |
| GetFullRefinableObj(const bool rebuild=true) | ObjCryst::OptimizationObj | |
| GetLastOptimElapsedTime() const | ObjCryst::OptimizationObj | |
| GetLogLikelihood() const | ObjCryst::OptimizationObj | [virtual] |
| GetMainTracker() | ObjCryst::OptimizationObj | |
| GetMainTracker() const | ObjCryst::OptimizationObj | |
| GetName() const | ObjCryst::OptimizationObj | |
| GetXMLAutoSaveOption() | ObjCryst::OptimizationObj | |
| GetXMLAutoSaveOption() const | ObjCryst::OptimizationObj | |
| InitOptions() | ObjCryst::MonteCarloObj | [protected, virtual] |
| IsOptimizing() const | ObjCryst::OptimizationObj | |
| mAnnealingScheduleMutation | ObjCryst::MonteCarloObj | [protected] |
| mAnnealingScheduleTemp | ObjCryst::MonteCarloObj | [protected] |
| mBestCost | ObjCryst::OptimizationObj | [protected] |
| mBestParSavedSetIndex | ObjCryst::OptimizationObj | [protected] |
| mContext | ObjCryst::OptimizationObj | [protected] |
| mCurrentCost | ObjCryst::MonteCarloObj | [protected] |
| mGlobalOptimType | ObjCryst::MonteCarloObj | [protected] |
| mIsOptimizing | ObjCryst::OptimizationObj | [protected] |
| mLastOptimTime | ObjCryst::OptimizationObj | [protected] |
| mMainTracker | ObjCryst::OptimizationObj | [protected] |
| mMinCostRetry | ObjCryst::MonteCarloObj | [protected] |
| mMutationAmplitude | ObjCryst::MonteCarloObj | [protected] |
| mMutationAmplitudeGamma | ObjCryst::MonteCarloObj | [protected] |
| mMutationAmplitudeMax | ObjCryst::MonteCarloObj | [protected] |
| mMutationAmplitudeMin | ObjCryst::MonteCarloObj | [protected] |
| mName | ObjCryst::OptimizationObj | [protected] |
| mNbTrial | ObjCryst::OptimizationObj | [protected] |
| mNbTrialRetry | ObjCryst::MonteCarloObj | [protected] |
| MonteCarloObj(const string name="") | ObjCryst::MonteCarloObj | |
| MonteCarloObj(const bool internalUseOnly) | ObjCryst::MonteCarloObj | |
| mRecursiveRefinedObjList | ObjCryst::OptimizationObj | [mutable, protected] |
| mRefinedObjList | ObjCryst::OptimizationObj | [protected] |
| mRefParList | ObjCryst::OptimizationObj | [mutable, protected] |
| mSaveFileName | ObjCryst::OptimizationObj | [protected] |
| mSaveTrackedData | ObjCryst::MonteCarloObj | [protected] |
| mStopAfterCycle | ObjCryst::OptimizationObj | [protected] |
| mTemperature | ObjCryst::MonteCarloObj | [protected] |
| mTemperatureGamma | ObjCryst::MonteCarloObj | [protected] |
| mTemperatureMax | ObjCryst::MonteCarloObj | [protected] |
| mTemperatureMin | ObjCryst::MonteCarloObj | [protected] |
| MultiRunOptimize(long &nbCycle, long &nbSteps, const bool silent=false, const REAL finalcost=0, const REAL maxTime=-1) | ObjCryst::MonteCarloObj | [virtual] |
| mvContextObjStats | ObjCryst::OptimizationObj | [mutable, protected] |
| mvObjWeight | ObjCryst::OptimizationObj | [mutable, protected] |
| mvSavedParamSet | ObjCryst::OptimizationObj | [protected] |
| mXMLAutoSave | ObjCryst::OptimizationObj | [protected] |
| NewConfiguration(const RefParType *type=gpRefParTypeObjCryst) | ObjCryst::MonteCarloObj | [protected, virtual] |
| OptimizationObj(const string name="") | ObjCryst::OptimizationObj | |
| Optimize(long &nbSteps, const bool silent=false, const REAL finalcost=0, const REAL maxTime=-1) | ObjCryst::MonteCarloObj | [virtual] |
| PrepareRefParList() | ObjCryst::OptimizationObj | [protected] |
| Print() const | ObjCryst::OptimizationObj | [virtual] |
| RandomizeStartingConfig() | ObjCryst::OptimizationObj | [virtual] |
| RestoreBestConfiguration() | ObjCryst::OptimizationObj | |
| RunParallelTempering(long &nbSteps, const bool silent=false, const REAL finalcost=0, const REAL maxTime=-1) | ObjCryst::MonteCarloObj | |
| RunSimulatedAnnealing(long &nbSteps, const bool silent=false, const REAL finalcost=0, const REAL maxTime=-1) | ObjCryst::MonteCarloObj | |
| SetAlgorithmParallTempering(const AnnealingSchedule scheduleTemp, const REAL tMax, const REAL tMin, const AnnealingSchedule scheduleMutation=ANNEALING_CONSTANT, const REAL mutMax=16., const REAL mutMin=.125) | ObjCryst::MonteCarloObj | |
| SetAlgorithmSimulAnnealing(const AnnealingSchedule scheduleTemp, const REAL tMax, const REAL tMin, const AnnealingSchedule scheduleMutation=ANNEALING_CONSTANT, const REAL mutMax=16., const REAL mutMin=.125, const long nbTrialRetry=0, const REAL minCostRetry=0.) | ObjCryst::MonteCarloObj | |
| SetLimitsAbsolute(const string &parName, const REAL min, const REAL max) | ObjCryst::OptimizationObj | |
| SetLimitsAbsolute(const RefParType *type, const REAL min, const REAL max) | ObjCryst::OptimizationObj | |
| SetLimitsRelative(const string &parName, const REAL min, const REAL max) | ObjCryst::OptimizationObj | |
| SetLimitsRelative(const RefParType *type, const REAL min, const REAL max) | ObjCryst::OptimizationObj | |
| SetName(const string &) | ObjCryst::OptimizationObj | |
| SetParIsFixed(const string &parName, const bool fix) | ObjCryst::OptimizationObj | |
| SetParIsFixed(const RefParType *type, const bool fix) | ObjCryst::OptimizationObj | |
| SetParIsUsed(const string &parName, const bool use) | ObjCryst::OptimizationObj | |
| SetParIsUsed(const RefParType *type, const bool use) | ObjCryst::OptimizationObj | |
| StopAfterCycle() | ObjCryst::OptimizationObj | |
| TagNewBestConfig() | ObjCryst::OptimizationObj | |
| UnFixAllPar() | ObjCryst::OptimizationObj | |
| UpdateDisplay() | ObjCryst::OptimizationObj | [protected, virtual] |
| XMLInput(istream &is, const XMLCrystTag &tag) | ObjCryst::MonteCarloObj | [virtual] |
| XMLOutput(ostream &os, int indent=0) const | ObjCryst::MonteCarloObj | [virtual] |
| ~MonteCarloObj() | ObjCryst::MonteCarloObj | [virtual] |
| ~OptimizationObj() | ObjCryst::OptimizationObj | [virtual] |
